Factsheet for GSMUA_Achr7P03630_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34940.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plasma membrane	48.02	82.65
GSMUA_Achr3P23680_001	Banana	plasma membrane	41.6	74.78
TraesCS7A01G281400.1	Wheat	cytosol, nucleus, plastid	6.52	66.67
Os06t0664300-01	Rice	plasma membrane	39.72	63.11
VIT_01s0011g01050.t01	Wine grape	extracellular, plasma membrane, vacuole	38.54	61.9
Zm00001d046945_P001	Maize	plasma membrane	37.94	61.05
TraesCS7B01G387100.1	Wheat	extracellular, plasma membrane	37.06	59.52
PGSC0003DMT400018916	Potato	plasma membrane	36.76	59.52
Os04t0611400-01	Rice	plasma membrane	37.15	59.49
TraesCS7D01G471300.1	Wheat	golgi	36.96	59.37
TraesCS7A01G483700.1	Wheat	golgi, plasma membrane	36.76	59.33
KRH37180	Soybean	plasma membrane	36.17	58.65
Solyc02g081970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	36.96	58.62
KRH12166	Soybean	plasma membrane	36.17	58.28
KXG27024	Sorghum	plasma membrane	35.18	58.17
CDY43178	Canola	plasma membrane	35.87	57.71
CDY12449	Canola	cytosol	16.5	57.59
CDY02347	Canola	plasma membrane	35.77	57.55
Bra023151.1-P	Field mustard	plasma membrane	35.77	57.55
AT1G30900.1	Thale cress	extracellular, plasma membrane, vacuole	35.87	57.53
TraesCS2B01G446100.1	Wheat	plasma membrane	36.17	57.01
TraesCS2A01G425800.2	Wheat	mitochondrion	36.07	56.94
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	36.86	56.86
TraesCS2D01G423700.1	Wheat	golgi	35.97	56.79
CDY50060	Canola	plasma membrane	35.28	56.76
AT4G20110.2	Thale cress	plasma membrane	34.98	56.37
Bra013445.1-P	Field mustard	plasma membrane	34.98	56.1
CDX78975	Canola	plasma membrane	34.88	55.94
KXG20551	Sorghum	plasma membrane, plastid	41.21	55.38
Bra039877.1-P	Field mustard	cytosol	17.98	55.15
GSMUA_Achr11P...	Banana	extracellular, golgi, plasma membrane	33.7	54.91
GSMUA_Achr6P16900_001	Banana	cytosol, nucleus, plasma membrane	30.34	54.05
AT2G34940.1	Thale cress	plasma membrane	33.0	54.05
GSMUA_Achr7P22040_001	Banana	extracellular, plasma membrane	33.1	53.86
GSMUA_Achr10P...	Banana	cytosol	30.04	53.52
Bra021940.1-P	Field mustard	plasma membrane	33.0	53.27
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	27.57	52.74
CDY64650	Canola	plasma membrane	32.61	52.55
CDY43647	Canola	plasma membrane	32.61	52.55
TraesCS7D01G145700.2	Wheat	cytosol	14.23	48.0
TraesCS7A01G436000.1	Wheat	mitochondrion	9.29	44.55
TraesCS6A01G310600.1	Wheat	cytosol	14.72	39.31
HORVU2Hr1G099640.3	Barley	extracellular	11.17	17.57

Protein Annotations

MapMan:22.5.2.1	Gene3D:3.30.559.10	Gene3D:3.50.30.30	MapMan:5.1.6.2.1	InterPro:CAT-like_dom_sf	ncoils:Coil
InterPro:EGF_Ca-bd_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr7G03630_001	EnsemblPlants:GSMUA_Achr7P03630_001
EnsemblPlants:GSMUA_Achr7T03630_001	InterPro:IPR023213	UniProt:M0TEF3	InterPro:PA_domain	PFAM:PF02225	PFAM:PF02458
ScanProsite:PS01187	PANTHER:PTHR22765	PANTHER:PTHR22765:SF56	SUPFAM:SSF52025	TMHMM:TMhelix	InterPro:Transferase
UniParc:UPI0002963013	SEG:seg	:	:	:	:

Description

Vacuolar-sorting receptor 7 [Source:GMGC_GENE;Acc:GSMUA_Achr7G03630_001]

Coordinates

chr7:-:2866292..2878028

Molecular Weight (calculated)

113149.0 Da

IEP (calculated)

6.301

GRAVY (calculated)

-0.299

Length

1012 amino acids

Sequence
(BLAST)

0001: MGVEQEKTVI YDHRISTVVP ATVTGNAVLH ELTNMDLIMK LHYLRAVYYF NQSEITDGIT IADLKNPMFL WLNICYPMAG RIRRAESGRP LIKCNDCGLR
0101: IIEARCRRTL GEWLDVESSS SSRWRLLVPD KVLGPDLQFS PMVYMQFTRF KCGGMAIGYS WAHVLGDPMS ATNCINLWGE LFSGNPPPKT LQLNNHQKKA
0201: ESAATHVKVS PKPIPVNQVE LIGDGWLAPN TRKMATNSFR ITETKLKKMQ PEQLKQVPTF VIISAMIWKC LAKIRKSRES KMATICRYLT LAKCSKILNN
0301: MLKTSTVRLD SSAANFGLLE LATLICKQEA DESKSVEELV DIENGKPDFV LYGANLTFVD MEGINLYGLE LKGQKPVQVD YSIDGVGDEG AVLVLQGPQR
0401: TNETSSNQER LVMVILPEDE IQQLCELLSS EFGIAQDLKI NHKLSVTNML WRWLTVSMVL TAVAFSCVSG RFVVEKNSVR VIRPEHIRGR HDAAIANFGV
0501: PHYGGTMVGV VKFPDKNRTT ACNAFNGTPF KSRSRRPVIL LVDRGDCYFA LKAWNAQQAG AAGVLVADNT DEPLLTMDNP EESQDLEYVD KITIPSAFIN
0601: HEFGETLKKA LAKGTTDHVI VKLDWRESMP HPDERVEYEF WMNSNDECGP RCDEQMNFVK NFRGHAQLLE KGGFTQFTPH YITWYCAPDP EQDFNEGCSM
0701: KDKKYSTDCA EDVLDASGLP LAKITKCMGD PEADVENDVL KTEQELQVGH DSRGDVTILP TLVINNVQYR GKLERIAVLK AICAGFKEST EPPVCLNGDI
0801: ETNECLRSNG GCWQDQKLNI TACKDTFRGR LCECPAVHGV QYQGDGYTSC QAVGPGRCAM DNGGCWSETR DGQTFSACSG SLLTGCRCPN GFHGDGYTCE
0901: DTDECKEKLA CNCPECSCKN KWGGYDCKCK GNLLYIKGED TCIAKNMSRS RWILMLLVLS CVAGAIAGYI FYKYRLRSYM DSEVMAIMSQ YMPLDNNDHR
1001: NEIQQLRQDS TA

Best Arabidopsis Sequence Match ( AT4G20110.1 )
(BLAST)

001: MGLVNGRASL TFLLAALTII AMVVEARFVV EKESISVLNP EEMRSKHDGS IANFGLPDYG GFLIGSVVYP DSKTDGCSAF GKTFKPKFPR PTILLLDRGG
101: CYFALKAWHA QQAGAAAVLV ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE SVPHPDKRVE YELWTNSNDE
201: CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW
301: WDYVTDFHSR CSMKEKKYSI DCAESVIKSL NLPIEKIKKC IGDPEADTEN QVLRTEQVSQ IGRGNRGDVT ILPTLVINNA QYRGRLERTA VLKAICAGFN
401: ETSEPAICLN TGLETNECLE NNGGCWQDTK ANITACQDTF RGRLCECPVV KGVQYKGDGY TSCTPYGPAR CTMNNGGCWS DTRNGLTFSA CSDSVSTGCK
501: CPEGFQGDGL TCEDINECKE RSVCQCSGCR CKNSWGGYKC SCSGDRLYIN DQDTCIERYG SKTAWWLTFL ILAIVAVAGL AGYIFYKYRF RSYMDSEIMT
601: IMSQYMPLES QRAREVPSEA EPFTL

Arabidopsis Description

VSR7VACUOLAR SORTING RECEPTOR 7 [Source:UniProtKB/TrEMBL;Acc:F4JUS0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.