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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G34940.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT2G34940.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT2G34940.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G425800.2 Wheat mitochondrion 95.95 96.1
TraesCS2D01G423700.1 Wheat golgi 95.02 95.16
Os04t0611400-01 Rice plasma membrane 77.26 78.48
KXG27024 Sorghum plasma membrane 72.27 75.82
TraesCS7B01G387100.1 Wheat extracellular, plasma membrane 65.58 66.83
GSMUA_AchrUn_... Banana plasma membrane 59.35 64.8
PGSC0003DMT400018916 Potato plasma membrane 60.12 61.76
KRH37180 Soybean plasma membrane 59.97 61.7
KRH12166 Soybean plasma membrane 60.12 61.47
VIT_01s0011g01050.t01 Wine grape extracellular, plasma membrane, vacuole 59.97 61.11
Solyc02g081970.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 60.44 60.81
AT4G20110.2 Thale cress plasma membrane 59.03 60.35
CDY50060 Canola plasma membrane 59.03 60.25
Bra013445.1-P Field mustard plasma membrane 59.19 60.22
CDX78975 Canola plasma membrane 59.03 60.06
CDY02347 Canola plasma membrane 58.41 59.62
CDY43178 Canola plasma membrane 58.41 59.62
AT1G30900.1 Thale cress extracellular, plasma membrane, vacuole 58.57 59.59
Bra023151.1-P Field mustard plasma membrane 58.26 59.46
TraesCS5B01G145700.1 Wheat golgi 56.54 57.71
TraesCS4B01G121300.2 Wheat extracellular 56.07 57.6
AT2G34940.1 Thale cress plasma membrane 54.21 56.31
CDY12449 Canola cytosol 25.39 56.21
TraesCS4B01G170000.1 Wheat plasma membrane 53.89 55.45
TraesCS1B01G148200.1 Wheat plasma membrane 54.52 55.38
TraesCS2B01G122400.1 Wheat golgi 54.98 55.24
CDY64650 Canola plasma membrane 53.43 54.62
Bra039877.1-P Field mustard cytosol 28.04 54.55
Bra021940.1-P Field mustard plasma membrane 53.27 54.55
CDY43647 Canola plasma membrane 52.96 54.14
TraesCS5B01G056400.1 Wheat extracellular 36.29 49.57
GSMUA_Achr7P03630_001 Banana plasma membrane 57.01 36.17
HORVU2Hr1G099640.3 Barley extracellular 22.12 22.08
Protein Annotations
EnsemblPlants:TraesCS2B01G446100.1EnsemblPlantsGene:TraesCS2B01G446100Gene3D:2.10.25.10Gene3D:3.50.30.30GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EGF_Ca-bd_CSInterPro:PA_domainPANTHER:PTHR22765PANTHER:PTHR22765:SF90PFAM:PF02225
ScanProsite:PS01187SEG:segSignalP:SignalP-noTMSUPFAM:SSF52025TIGR:cd00054TMHMM:TMhelix
MapMan:22.5.2.1:::::
Description
No Description!
Coordinates
chr2B:-:638969078..638971513
Molecular Weight (calculated)
69473.0 Da
IEP (calculated)
5.450
GRAVY (calculated)
-0.273
Length
642 amino acids
Sequence
(BLAST)
001: MAMALHGHAK RGRLAAALWL VVVATASVAS ARFVVEKNSI KVLSPHWLRG RHEAAIANYG VPDYGGMLTG VVLYPADAKQ ANGCKPFGAT AFKSRSGRPV
101: VLLVDRGGCY FALKTWNAQQ AGVAAVLVAD SVDEPLLTMD TPEEETPDMA FLANITAPSA LVSKPFGDAL RAAASGDSSA AEVVVRLDWR ESMPNPDARV
201: EYEFWTNSND ECGPRCDEQA AFVAAFRGHA QLLEKAGDAL FTPHYITWFC PDEYRGTRQC ASQCINRGRY CAPDPEGDLG AGYQGRDVVL ENLRQLCVHR
301: VANARNASWA WWDFVADYRV RCSMREKKYS RGCAEEVVAS LGLPAELIDK CMGDPDADAD NDVLRTEQIV QVGQGNRGDV TILPTLVINN VQYRGKLEST
401: AVLKAICAGF KETTEPRVCM TQDMETDECL HNNGGCWRDE KTNITACKDT YRGRVCECPA VDGVQYEGNG YKECKPVGPG RCAANNGGCW KETRHGKTFS
501: ACKGSGSLSG CECPPGFRGD GLTCEDVDEC SEKAACTCPG CSCRNTWGGY HCRCGGDGNQ VYIQAEDTCV GKSAAAAGWL VTALVLSCLA GAGLAGFAFY
601: KYRLRRYMDS EVAAIMSQYM PLESQSTTGE NRPLREEAVE AA
Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)
001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A
Arabidopsis Description
VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.