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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G273100.1
TraesCS2D01G272400.1
TraesCS5A01G326100.1
TraesCS5B01G326500.1
TraesCS5D01G332200.1
TraesCS7A01G493400.1
TraesCS7B01G404000.1
TraesCS7D01G480900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G14720.1 TraesCS2A01G273100.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS2D01G272400.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS5A01G326100.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS5B01G326500.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS5D01G332200.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS7A01G493400.1 AT5G20500.1 23738689
AT2G14720.1 TraesCS7B01G404000.1 AT5G20500.1 23738689
AT2G14720.1 TraesCS7D01G480900.1 AT5G20500.1 23738689
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G131100.1 Wheat golgi 98.42 98.26
TraesCS1A01G134600.2 Wheat extracellular, plasma membrane, vacuole 98.26 97.34
HORVU1Hr1G032780.9 Barley extracellular 90.19 89.62
Os10t0346600-00 Rice plasma membrane 87.18 87.32
Zm00001d014302_P003 Maize plasma membrane 85.13 87.06
Zm00001d014303_P002 Maize plasma membrane 80.85 82.55
GSMUA_Achr6P16900_001 Banana cytosol, nucleus, plasma membrane 72.47 80.63
GSMUA_Achr10P... Banana cytosol 71.68 79.75
KRG91109 Soybean endoplasmic reticulum 73.58 73.69
KRH35666 Soybean endoplasmic reticulum 73.26 73.38
CDX93144 Canola extracellular, plasma membrane, vacuole 69.94 72.46
CDX81459 Canola plasma membrane 71.52 72.44
CDY37219 Canola extracellular, golgi, plasma membrane 71.36 72.28
PGSC0003DMT400066159 Potato endoplasmic reticulum, plasma membrane, vacuole 71.68 71.9
AT2G14720.1 Thale cress extracellular, plasma membrane, vacuole 71.36 71.82
AT2G14740.1 Thale cress extracellular, plasma membrane, vacuole 71.36 71.82
Bra039817.1-P Field mustard extracellular, golgi, plasma membrane 70.89 71.79
Solyc01g107130.2.1 Tomato nucleus 71.36 71.59
VIT_03s0091g00740.t01 Wine grape plasma membrane 71.36 71.47
KRH27575 Soybean endoplasmic reticulum 70.89 71.34
Bra013121.1-P Field mustard extracellular, plasma membrane, vacuole 71.2 71.32
CDY65441 Canola plasma membrane 71.04 71.16
KRH77935 Soybean endoplasmic reticulum 70.41 69.21
TraesCS5B01G145700.1 Wheat golgi 66.3 66.61
TraesCS4B01G121300.2 Wheat extracellular 65.51 66.24
TraesCS4B01G170000.1 Wheat plasma membrane 63.61 64.42
TraesCS2B01G122400.1 Wheat golgi 62.66 61.97
TraesCS5B01G056400.1 Wheat extracellular 42.56 57.23
TraesCS7B01G387100.1 Wheat extracellular, plasma membrane 55.7 55.87
TraesCS2B01G446100.1 Wheat plasma membrane 55.38 54.52
Protein Annotations
EnsemblPlants:TraesCS1B01G148200.1EnsemblPlantsGene:TraesCS1B01G148200Gene3D:2.10.25.10Gene3D:3.50.30.30GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EGF_Ca-bd_CSInterPro:PA_domainPANTHER:PTHR22765PANTHER:PTHR22765:SF54PFAM:PF02225
ScanProsite:PS01187SEG:segSignalP:SignalP-noTMSUPFAM:SSF52025TIGR:cd00054TMHMM:TMhelix
MapMan:22.5.2.1:::::
Description
No Description!
Coordinates
chr1B:+:216452006..216499045
Molecular Weight (calculated)
70546.9 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.404
Length
632 amino acids
Sequence
(BLAST)
001: MWGLGFRWLL LLLAFAAAVE LEARFVVEKN SLMVTSPTAL RGRHDSAIGN FGIPQYGGSM AGAVVYPKGN SDACEAFNSG RKEHLFRTKP GALPSFLLID
101: RGNCLFAKKV WNAQYAGASA VLVVDDKDEP LITMDLLQED DEAAKYIQNI SIPSALIDKK FGEQLKKAVK DGEMVNVDLD WREAVPHPDN RVEYELWTNS
201: NDECGPKCDM LMHFLKEFKG AAQLLEKGGY SQFTPHYITW YCPQAFVVSK QCKSQCINHG RYCAPDPEQD FSTGYDGKDV VVENLRQLCV FNVANEIKKP
301: WIWWDYVTDF HIRCPMKEKK YNKKCAETVV KSLGLEMQKI DKCMGDPNDD SDHPLLKMEQ DSQIGKGSRG DVTILPTLVV NNRQYRGKLG RKAVLKAICA
401: GFEETTEPNV CLSDDIETNE CLSDNGGCWQ DKAANVTACR DTFRGRVCEC PTFNGVQFKG DGYSNCEPAG PGKCLINHGG CWHETRNGKT FSACQESGDQ
501: KCKCPAGFRG DGVKKCHDID ECKERKACQC PECSCRDTWG GYDCTCSGDL LYIKEHDTCI SKTTVQAKAA WAAVWGILVA LVIVAAGSYV VYKYRLRAYM
601: DSEIRAIMAQ YMPLDNQGEV PYDSHEDHPL AH
Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)
001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA
Arabidopsis Description
VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.