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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G273100.1
TraesCS2D01G272400.1
TraesCS5A01G326100.1
TraesCS5B01G326500.1
TraesCS5D01G332200.1
TraesCS7A01G493400.1
TraesCS7B01G404000.1
TraesCS7D01G480900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G14720.1 TraesCS2A01G273100.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS2D01G272400.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS5A01G326100.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS5B01G326500.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS5D01G332200.1 AT4G16190.1 23738689
AT2G14720.1 TraesCS7A01G493400.1 AT5G20500.1 23738689
AT2G14720.1 TraesCS7B01G404000.1 AT5G20500.1 23738689
AT2G14720.1 TraesCS7D01G480900.1 AT5G20500.1 23738689
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G131100.1 Wheat golgi 98.75 99.53
TraesCS1B01G148200.1 Wheat plasma membrane 97.34 98.26
HORVU1Hr1G032780.9 Barley extracellular 90.13 90.41
Os10t0346600-00 Rice plasma membrane 87.3 88.27
Zm00001d014302_P003 Maize plasma membrane 84.8 87.54
Zm00001d014303_P002 Maize plasma membrane 80.41 82.88
GSMUA_Achr6P16900_001 Banana cytosol, nucleus, plasma membrane 72.1 80.99
GSMUA_Achr10P... Banana cytosol 71.16 79.93
KRG91109 Soybean endoplasmic reticulum 73.51 74.33
KRH35666 Soybean endoplasmic reticulum 73.2 74.01
CDX81459 Canola plasma membrane 71.16 72.76
CDY37219 Canola extracellular, golgi, plasma membrane 71.16 72.76
CDX93144 Canola extracellular, plasma membrane, vacuole 69.44 72.62
PGSC0003DMT400066159 Potato endoplasmic reticulum, plasma membrane, vacuole 71.47 72.38
AT2G14740.1 Thale cress extracellular, plasma membrane, vacuole 71.16 72.29
AT2G14720.1 Thale cress extracellular, plasma membrane, vacuole 71.16 72.29
Bra039817.1-P Field mustard extracellular, golgi, plasma membrane 70.53 72.12
VIT_03s0091g00740.t01 Wine grape plasma membrane 71.32 72.11
Solyc01g107130.2.1 Tomato nucleus 71.0 71.9
KRH27575 Soybean endoplasmic reticulum 70.53 71.66
Bra013121.1-P Field mustard extracellular, plasma membrane, vacuole 70.69 71.47
CDY65441 Canola plasma membrane 70.53 71.32
KRH77935 Soybean endoplasmic reticulum 70.06 69.52
TraesCS4A01G193900.1 Wheat extracellular 65.2 66.45
TraesCS5A01G146800.2 Wheat golgi 65.67 65.98
TraesCS7A01G281400.1 Wheat cytosol, nucleus, plastid 9.87 63.64
TraesCS2A01G105500.1 Wheat golgi 62.07 61.88
TraesCS4A01G135100.3 Wheat plasma membrane 63.32 60.66
TraesCS7A01G483700.1 Wheat golgi, plasma membrane 55.33 56.3
TraesCS2A01G425800.2 Wheat mitochondrion 54.08 53.82
TraesCS5A01G050500.1 Wheat extracellular, mitochondrion 42.32 52.43
TraesCS5A01G050400.2 Wheat extracellular, plasma membrane 40.6 51.39
TraesCS6A01G310600.1 Wheat cytosol 26.02 43.8
TraesCS7A01G436000.1 Wheat mitochondrion 13.64 41.23
TraesCS4A01G252300.1 Wheat extracellular, mitochondrion 8.46 37.24
Protein Annotations
EnsemblPlants:TraesCS1A01G134600.2EnsemblPlantsGene:TraesCS1A01G134600Gene3D:2.10.25.10Gene3D:3.50.30.30GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EGF_Ca-bd_CSInterPro:PA_domainPANTHER:PTHR22765PANTHER:PTHR22765:SF54PFAM:PF02225
ScanProsite:PS01187SEG:segSignalP:SignalP-noTMSUPFAM:SSF52025TIGR:cd00054TMHMM:TMhelix
MapMan:22.5.2.1:::::
Description
No Description!
Coordinates
chr1A:-:202072942..202101802
Molecular Weight (calculated)
71047.5 Da
IEP (calculated)
6.047
GRAVY (calculated)
-0.393
Length
638 amino acids
Sequence
(BLAST)
001: MWGLGFRWLL LLLLAFAAAV ELEARFVVEK NSLMVTSPTA LRGRHDSAIG NFGIPQYGGS MAGAVVYPKG NSDACEAFNS GRKEHLFRTK PGALPSFLLI
101: DRGNCLFAKK VWNAQYAGAS AVLVVDDKDE PLITMDLLQE DDEAAKYIQN ISIPSALIDK KFGEQLKKAV KDGEMVNVNL DWREAVPHPD NRVEYELWTN
201: SNDECGPKCD MLMHFLKEFK GAAQLLEKGG YSQFTPHYIT WYCPQAFVVS KQCKSQCINH GRYCAPDPEQ DFSTGYDGKD VVVENLRQLC VFNVANEIKK
301: PWIWWDYVTD FHIRCPMKEK KYNKKCAETV IKSLGLEVKK IDKCMGDPND DSDHPLLKME QDSQIGKGSR GDVTILPTLV VNNRQYRVLK GTGKLGRKAV
401: LKAICAGFEE TTEPNVCLSD DMETNECLSD NGGCWQDNAA NVTACRDTFR GRVCECPTFN GVQFKGDGYS NCEPAGPGKC LINHGGCWHE TRNGKTFSAC
501: QESGDQNCKC PAGFRGDGVK KCDDIDECKE RKACQCPECS CRDTWGGYDC TCSGDLLYIK EHDTCISKTT VQAKAAWAAV WGILVALVIV AAGSYVVYKY
601: RLRSYMDSEI RAIMAQYMPL DSQGEVPNDS HEDHPLAH
Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)
001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA
Arabidopsis Description
VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.