Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G061200.2 | Wheat | extracellular | 82.33 | 82.01 |
| TraesCS5B01G056400.1 | Wheat | extracellular | 71.84 | 78.72 |
| TraesCS5A01G050400.2 | Wheat | extracellular, plasma membrane | 74.37 | 75.99 |
| TraesCS4A01G252300.1 | Wheat | extracellular, mitochondrion | 15.73 | 55.86 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 55.53 | 54.06 |
| TraesCS7A01G281400.1 | Wheat | cytosol, nucleus, plastid | 10.29 | 53.54 |
| TraesCS4A01G193900.1 | Wheat | extracellular | 58.84 | 48.4 |
| TraesCS5A01G146800.2 | Wheat | golgi | 59.22 | 48.03 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 57.67 | 47.83 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 57.67 | 47.75 |
| TraesCS2A01G105500.1 | Wheat | golgi | 55.53 | 44.69 |
| TraesCS4A01G135100.3 | Wheat | plasma membrane | 55.34 | 42.79 |
| TraesCS1A01G134600.2 | Wheat | extracellular, plasma membrane, vacuole | 52.43 | 42.32 |
| TraesCS7A01G483700.1 | Wheat | golgi, plasma membrane | 46.02 | 37.8 |
| TraesCS2A01G425800.2 | Wheat | mitochondrion | 45.24 | 36.35 |
| TraesCS6A01G310600.1 | Wheat | cytosol | 23.88 | 32.45 |
| TraesCS7A01G436000.1 | Wheat | mitochondrion | 12.23 | 29.86 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G050500.1 | EnsemblPlantsGene:TraesCS5A01G050500 | Gene3D:3.50.30.30 | InterPro:PA_domain | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF57 |
| PFAM:PF02225 | SignalP:SignalP-noTM | SUPFAM:SSF52025 | MapMan:22.5.2.1 | : | : |
Description
No Description!
Coordinates
chr5A:-:46143371..46163215
Molecular Weight (calculated)
57611.5 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.438
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRLLIIWAA ILGCCHGQSE VSRRNSRLKV MSPPELEATY DFAIADFGFP HHGGSMTGVV VYPRHNGQAC GDFDEYGISL RSRRAGALPV FLLVDRGECF
101: FATKVRNGQK AGAAAVLVAD TKLEPLFAIE GAESRSASKT DALEDITIPS ALITKNLGDS LKKAMDNGDL VNVNLDWGES RPYPNERAEY EFWTNSIDEC
201: GPKCDNQVDF LKRFKGVAQT LEKKGYTQFT PHYITWYCPE NFVLSKQCKS QCINHGRYCA PDPEQGSSKG YNGRDVVIQN LYQICVFKVS KKTGKPWLWW
301: DYVTHFSIMC PMKKKMYTHE CASGVIRSLG LSQKAVEMCV GDPDMDEDHP VLKDEQDAQI GKGSHSDVTM LPTLVINNRQ YRGKLEKGAV LRALCASFRE
401: NSEPSICSNE EEDIQTNQCL DNNGGCWQDM AANVTACKDT STGTICECPV FQGVKYIGDG YNHCEARMDV QRGTNSQDRP RQIKNHETKK TKIEVAHEVI
501: YNLFLGIQKL AHKVF
101: FATKVRNGQK AGAAAVLVAD TKLEPLFAIE GAESRSASKT DALEDITIPS ALITKNLGDS LKKAMDNGDL VNVNLDWGES RPYPNERAEY EFWTNSIDEC
201: GPKCDNQVDF LKRFKGVAQT LEKKGYTQFT PHYITWYCPE NFVLSKQCKS QCINHGRYCA PDPEQGSSKG YNGRDVVIQN LYQICVFKVS KKTGKPWLWW
301: DYVTHFSIMC PMKKKMYTHE CASGVIRSLG LSQKAVEMCV GDPDMDEDHP VLKDEQDAQI GKGSHSDVTM LPTLVINNRQ YRGKLEKGAV LRALCASFRE
401: NSEPSICSNE EEDIQTNQCL DNNGGCWQDM AANVTACKDT STGTICECPV FQGVKYIGDG YNHCEARMDV QRGTNSQDRP RQIKNHETKK TKIEVAHEVI
501: YNLFLGIQKL AHKVF
001: MKQLLCYLPW LLLLSLVVSP FNEARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
Arabidopsis Description
VSR4Vacuolar-sorting receptor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZQ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.