Factsheet for GSMUA_AchrUn_randomP24340_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22040_001	Banana	extracellular, plasma membrane	86.01	73.15
GSMUA_Achr11P...	Banana	extracellular, golgi, plasma membrane	85.63	72.95
EES09132	Sorghum	plasma membrane	78.45	66.19
Os11t0116550-01	Rice	extracellular, plasma membrane, vacuole	78.26	66.13
Zm00001d005062_P003	Maize	plasma membrane	77.88	66.03
Zm00001d052354_P005	Maize	plasma membrane	77.69	65.97
TraesCS5D01G145500.1	Wheat	plasma membrane	76.18	65.0
TraesCS4D01G119400.1	Wheat	golgi	76.37	64.64
TraesCS5B01G145700.1	Wheat	golgi	76.37	64.23
TraesCS4A01G193900.1	Wheat	extracellular	75.99	64.22
HORVU4Hr1G022950.10	Barley	extracellular	75.8	64.16
HORVU5Hr1G046490.2	Barley	cytosol	68.24	64.12
TraesCS4B01G121300.2	Wheat	extracellular	75.61	64.0
TraesCS5A01G146800.2	Wheat	golgi	76.18	63.46
TraesCS5B01G056400.1	Wheat	extracellular	55.39	62.34
Os03t0335300-01	Rice	plasma membrane	72.4	60.99
Os07t0680000-01	Rice	plasma membrane	71.08	60.06
Zm00001d029056_P002	Maize	extracellular, plasma membrane, vacuole	71.08	60.06
TraesCS4D01G172100.1	Wheat	golgi	70.51	59.78
EER94904	Sorghum	extracellular, plasma membrane, vacuole	70.89	59.62
TraesCS4B01G170000.1	Wheat	plasma membrane	70.13	59.46
TraesCS2D01G105100.1	Wheat	plasma membrane	70.89	58.96
TraesCS2B01G122400.1	Wheat	golgi	70.89	58.69
TraesCS2A01G105500.1	Wheat	golgi	70.7	58.44
TraesCS5D01G061200.2	Wheat	extracellular	56.14	57.45
EER99915	Sorghum	plasma membrane	68.81	57.23
Zm00001d047522_P002	Maize	extracellular, plasma membrane, vacuole	70.51	57.03
Os12t0116000-01	Rice	plastid	78.26	56.87
Zm00001d022439_P001	Maize	extracellular, plasma membrane, vacuole	67.67	56.56
TraesCS4A01G135100.3	Wheat	plasma membrane	69.94	55.56
TraesCS5A01G050500.1	Wheat	extracellular, mitochondrion	54.06	55.53
GSMUA_Achr6P16900_001	Banana	cytosol, nucleus, plasma membrane	59.55	55.46
TraesCS5A01G050400.2	Wheat	extracellular, plasma membrane	52.74	55.36
GSMUA_Achr10P...	Banana	cytosol	58.98	54.93
GSMUA_AchrUn_...	Banana	plasma membrane	56.33	50.68
HORVU4Hr1G050280.9	Barley	plastid	62.76	50.61
GSMUA_Achr3P23680_001	Banana	plasma membrane	51.23	48.13
HORVU2Hr1G017770.3	Barley	plastid	71.83	45.62
TraesCS4A01G252300.1	Wheat	extracellular, mitochondrion	10.78	39.31
GSMUA_Achr7P03630_001	Banana	plasma membrane	52.74	27.57

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP24340_001	EnsemblPlants:GSMUA_AchrUn_randomT24340_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG24340_001	Gene3D:3.40.30.10	Gene3D:3.50.30.30	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:PA_domain	PANTHER:PTHR22765	PANTHER:PTHR22765:SF47	PFAM:PF02225
SignalP:SignalP-noTM	SUPFAM:SSF52025	TMHMM:TMhelix	UniParc:UPI0002953B5A	UniProt:M0UBZ2	MapMan:22.5.2.1

Description

Vacuolar-sorting receptor 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24340_001]

Coordinates

chrchrUn_random:+:120968517..120973198

Molecular Weight (calculated)

59519.0 Da

IEP (calculated)

7.161

GRAVY (calculated)

-0.352

Length

529 amino acids

Sequence
(BLAST)

001: MGGRMLWLLV PVLFLCGTCW GRFVVEKNSL KVTSPNSLKG IYESAIGNFG VPQYGGTMVG IVAYPKVNWK ACHNFKDFDI SYKSKPGGFP TFLLVDRGDC
101: YFITKAWNAQ NSGAAAVLVA DNVAEPLITM NTPEEENSKA DYLQNITIPS ALISKSFGDR LKKAIENGDM VSVNLDWKES LPHPDNRVEY EFWTNCNDEC
201: GPKCDSQIQF FKNFKGAAQI LEKKSYTKFT PHYITWYCAE IFLSSKRCKS QCINHGRYCA PDPEQDFSKG YDGKDVVMQN LRQVCLFKVA SESGKPWLWW
301: DYVTDFAIRC PMKEKKYTKG CAEEVIKALG VDLKKINKCM GDPDADEENP VLKAEQDAQI GKDSRGDVTI LPTLVINNRQ YRGNLDRTAV LKAICAGFKE
401: TTEPAVCLSD DIQTNECLEN NGGCWQDKAS NITACKDTFR GRLCECPVVE GVKFVGDGYT HCKAKKPSTE GGWSFLWVFF ILTIAGVGAY CLYKYRFRSY
501: MDSEIRAIMA QYMPLENPEA QSHIRNDQS

Best Arabidopsis Sequence Match ( AT3G52850.1 )
(BLAST)

001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI

Arabidopsis Description

VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.