Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G056400.1 | Wheat | extracellular | 80.46 | 88.51 |
| TraesCS5A01G050500.1 | Wheat | extracellular, mitochondrion | 82.01 | 82.33 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 57.45 | 56.14 |
| TraesCS5D01G145500.1 | Wheat | plasma membrane | 60.93 | 50.81 |
| TraesCS4D01G119400.1 | Wheat | golgi | 60.54 | 50.08 |
| TraesCS7D01G145700.2 | Wheat | cytosol | 29.01 | 50.0 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 59.77 | 49.76 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 59.38 | 49.36 |
| TraesCS4D01G172100.1 | Wheat | golgi | 57.25 | 47.44 |
| TraesCS2D01G105100.1 | Wheat | plasma membrane | 58.22 | 47.33 |
| TraesCS1D01G131100.1 | Wheat | golgi | 54.16 | 44.23 |
| TraesCS7D01G471300.1 | Wheat | golgi | 47.58 | 39.05 |
| TraesCS2D01G423700.1 | Wheat | golgi | 46.23 | 37.29 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G061200.2 | EnsemblPlantsGene:TraesCS5D01G061200 | Gene3D:3.50.30.30 | InterPro:PA_domain | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF47 |
| PFAM:PF02225 | SignalP:SignalP-noTM | SUPFAM:SSF52025 | MapMan:22.5.2.1 | : | : |
Description
No Description!
Coordinates
chr5D:-:57993425..58000647
Molecular Weight (calculated)
57816.8 Da
IEP (calculated)
6.496
GRAVY (calculated)
-0.376
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRLLLIWAA ILGCCHGQSE VSRRNSLLKV MSPPELEGTY GCASADFGFP QHAGSMTGVV VYPRPNTMAC MNFDDFGISF RSRRAGGPPV ILLVDRGGCY
101: FTTKVQNGQK AGAAAVLIVN HRNEPLFAID EPESGETTLD LHLQDITIPS ALITKSLGES LRKASNNGDL VNVNLDWEES RPHPHERAEY EFWTNGNDEC
201: GPKCDEQVDF LKRFKGVAQT LEKKGYTQFT PHYITWYCPE NFVLSKQCKS QCINHGRYCA PDPEQGFSKG YDGRDVVLQN LYQICVFKVA KKTGKPWLWW
301: DYVTHFAIMC PMKKKMYTHE CASGVIRSLG LSQKAVDMCV GDPHADEDHP VLKDEQDAQI GKGSRSDVTM LPTLVINNRQ YKGKLEKGAV LRALCASFRE
401: NNEPSVCSNE EEDIQTNQCL DNNGGCWQDM AANVTACKDT STGTVCECPV LQGVKYIGDG YNHCEAPMYV QIETINQDWP QPIKIRNTHT YSSYLTEVVH
501: KAIYNLFSGI FVAHKVF
101: FTTKVQNGQK AGAAAVLIVN HRNEPLFAID EPESGETTLD LHLQDITIPS ALITKSLGES LRKASNNGDL VNVNLDWEES RPHPHERAEY EFWTNGNDEC
201: GPKCDEQVDF LKRFKGVAQT LEKKGYTQFT PHYITWYCPE NFVLSKQCKS QCINHGRYCA PDPEQGFSKG YDGRDVVLQN LYQICVFKVA KKTGKPWLWW
301: DYVTHFAIMC PMKKKMYTHE CASGVIRSLG LSQKAVDMCV GDPHADEDHP VLKDEQDAQI GKGSRSDVTM LPTLVINNRQ YKGKLEKGAV LRALCASFRE
401: NNEPSVCSNE EEDIQTNQCL DNNGGCWQDM AANVTACKDT STGTVCECPV LQGVKYIGDG YNHCEAPMYV QIETINQDWP QPIKIRNTHT YSSYLTEVVH
501: KAIYNLFSGI FVAHKVF
001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA
Arabidopsis Description
VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.