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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • mitochondrion 5
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:mitochondrion
 golgi: 23128297
msms, gfp PMID: 23128297 doi
M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G34940.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT2G34940.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT2G34940.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G425800.2 Wheat mitochondrion 97.04 97.04
TraesCS2B01G446100.1 Wheat plasma membrane 95.16 95.02
Os04t0611400-01 Rice plasma membrane 77.54 78.64
KXG27024 Sorghum plasma membrane 71.76 75.16
TraesCS7D01G471300.1 Wheat golgi 66.46 67.62
GSMUA_AchrUn_... Banana plasma membrane 58.97 64.29
TraesCS7D01G145700.2 Wheat cytosol 29.95 64.0
KRH37180 Soybean plasma membrane 60.06 61.7
PGSC0003DMT400018916 Potato plasma membrane 60.06 61.6
KRH12166 Soybean plasma membrane 59.91 61.15
VIT_01s0011g01050.t01 Wine grape extracellular, plasma membrane, vacuole 59.91 60.95
AT4G20110.2 Thale cress plasma membrane 59.59 60.83
Solyc02g081970.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 60.53 60.81
CDY50060 Canola plasma membrane 59.28 60.41
Bra013445.1-P Field mustard plasma membrane 59.44 60.38
CDX78975 Canola plasma membrane 59.28 60.22
Bra023151.1-P Field mustard plasma membrane 57.88 58.98
CDY43178 Canola plasma membrane 57.72 58.82
CDY02347 Canola plasma membrane 57.72 58.82
AT1G30900.1 Thale cress extracellular, plasma membrane, vacuole 57.57 58.48
TraesCS5D01G145500.1 Wheat plasma membrane 55.69 57.58
TraesCS4D01G119400.1 Wheat golgi 55.85 57.28
AT2G34940.1 Thale cress plasma membrane 53.67 55.66
TraesCS2D01G105100.1 Wheat plasma membrane 54.91 55.35
TraesCS4D01G172100.1 Wheat golgi 53.82 55.29
CDY12449 Canola cytosol 24.8 54.83
TraesCS1D01G131100.1 Wheat golgi 53.98 54.66
Bra039877.1-P Field mustard cytosol 27.93 54.24
Bra021940.1-P Field mustard plasma membrane 52.89 54.07
CDY64650 Canola plasma membrane 52.89 53.98
CDY43647 Canola plasma membrane 52.57 53.66
TraesCS5D01G061200.2 Wheat extracellular 37.29 46.23
GSMUA_Achr7P03630_001 Banana plasma membrane 56.79 35.97
HORVU2Hr1G099640.3 Barley extracellular 22.0 21.93
Protein Annotations
EnsemblPlants:TraesCS2D01G423700.1EnsemblPlantsGene:TraesCS2D01G423700Gene3D:2.10.25.10Gene3D:3.50.30.30GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EGF_Ca-bd_CSInterPro:PA_domainPANTHER:PTHR22765PANTHER:PTHR22765:SF90PFAM:PF02225
ScanProsite:PS01187SEG:segSignalP:SignalP-noTMSUPFAM:SSF52025TIGR:cd00054TMHMM:TMhelix
MapMan:22.5.2.1:::::
Description
No Description!
Coordinates
chr2D:-:536919598..536922058
Molecular Weight (calculated)
69163.7 Da
IEP (calculated)
5.830
GRAVY (calculated)
-0.265
Length
641 amino acids
Sequence
(BLAST)
001: MAMALHGHGR RGRLAAALWL VVVATASVAS ARFVVEKNSI KVLSPHSLRG RHEAAIANYG VPDYGGTLTG VVLYPADAGQ ANGCKPFGAT AFKSRSSRPV
101: VLLVDRGGCY FALKTWHAQQ AGAAAVLVAD SVDEPLLTMD TPEEETPDMA FLANITAPSA LVSKPFGDAL RAAASSSGGA EVVVRLDWRE SMPNPDARVE
201: YELWTNSNDE CGPRCDEQAA FVAAFRGHAQ LLEKAGDALF TPHYITWFCP DEYRGTRQCA SQCINRGRYC APDPEGDLGA GYRGRDVVLE NLRQLCVHRV
301: ANARNASWAW WDFVADYRVR CSMREKKYSR GCAEEVVASL GLPAEMIEKC MGDPDADADN DVLRTEQVVQ VGQGNRGDVT ILPTLVINNV QYRGKLESTA
401: VLKAICAGFK ETTEPRVCMT QDMETDECMH NNGGCWRDDK TNITACRDTY RGRVCECPAV DGVQYEGNGY KECKPVGPGR CAANNGGCWK ETRHGKTFSA
501: CKGSGSLSGC ECPPGFKGDG ITCEDVDECS EKLACTCPGC SCRNNWGGYH CSCGGGGNQV YIQAEDTCVG KSAAAMGWLV AVLVLSCLAG AGLAGFAFYK
601: YRLRRYMDSE VAAIMSQYMP LEGQSTSGEH RPLREEAVEA A
Best Arabidopsis Sequence Match ( AT4G20110.1 )
(BLAST)
001: MGLVNGRASL TFLLAALTII AMVVEARFVV EKESISVLNP EEMRSKHDGS IANFGLPDYG GFLIGSVVYP DSKTDGCSAF GKTFKPKFPR PTILLLDRGG
101: CYFALKAWHA QQAGAAAVLV ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE SVPHPDKRVE YELWTNSNDE
201: CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW
301: WDYVTDFHSR CSMKEKKYSI DCAESVIKSL NLPIEKIKKC IGDPEADTEN QVLRTEQVSQ IGRGNRGDVT ILPTLVINNA QYRGRLERTA VLKAICAGFN
401: ETSEPAICLN TGLETNECLE NNGGCWQDTK ANITACQDTF RGRLCECPVV KGVQYKGDGY TSCTPYGPAR CTMNNGGCWS DTRNGLTFSA CSDSVSTGCK
501: CPEGFQGDGL TCEDINECKE RSVCQCSGCR CKNSWGGYKC SCSGDRLYIN DQDTCIERYG SKTAWWLTFL ILAIVAVAGL AGYIFYKYRF RSYMDSEIMT
601: IMSQYMPLES QRAREVPSEA EPFTL
Arabidopsis Description
VSR7VACUOLAR SORTING RECEPTOR 7 [Source:UniProtKB/TrEMBL;Acc:F4JUS0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.