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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023151.1-P Field mustard plasma membrane 99.36 99.36
CDY02347 Canola plasma membrane 99.36 99.36
AT1G30900.1 Thale cress extracellular, plasma membrane, vacuole 93.96 93.66
CDY12449 Canola cytosol 36.41 78.97
CDY64650 Canola plasma membrane 72.5 72.61
CDY43647 Canola plasma membrane 72.02 72.13
CDY50060 Canola plasma membrane 68.04 68.04
CDX78975 Canola plasma membrane 67.73 67.51
CDY62643 Canola mitochondrion 9.86 65.26
GSMUA_Achr3P23680_001 Banana plasma membrane 58.19 65.01
Os06t0664300-01 Rice plasma membrane 65.02 64.21
GSMUA_AchrUn_... Banana plasma membrane 59.94 64.12
Zm00001d046945_P001 Maize plasma membrane 63.43 63.43
TraesCS7D01G471300.1 Wheat golgi 62.0 61.9
TraesCS7B01G387100.1 Wheat extracellular, plasma membrane 62.0 61.9
TraesCS7A01G483700.1 Wheat golgi, plasma membrane 61.53 61.72
TraesCS7A01G281400.1 Wheat cytosol, nucleus, plastid 9.7 61.62
CDY37219 Canola extracellular, golgi, plasma membrane 60.73 61.22
CDX81459 Canola plasma membrane 60.41 60.9
Os04t0611400-01 Rice plasma membrane 60.89 60.6
CDX93144 Canola extracellular, plasma membrane, vacuole 58.66 60.49
CDY65441 Canola plasma membrane 59.62 59.43
TraesCS7D01G145700.2 Wheat cytosol 28.3 59.33
HORVU7Hr1G109180.2 Barley mitochondrion, plasma membrane, vacuole 61.84 59.3
KXG27024 Sorghum plasma membrane 57.07 58.66
TraesCS2B01G446100.1 Wheat plasma membrane 59.62 58.41
CDX73599 Canola plasma membrane 57.71 58.08
CDX78128 Canola plasma membrane 57.71 58.08
TraesCS2A01G425800.2 Wheat mitochondrion 59.14 58.03
CDY13344 Canola plasma membrane 57.55 57.92
CDY60753 Canola plasma membrane 57.07 57.9
CDX67539 Canola plasma membrane 57.39 57.76
CDX91478 Canola plasma membrane 56.92 57.74
TraesCS2D01G423700.1 Wheat golgi 58.82 57.72
CDX99194 Canola cytosol 9.38 57.28
CDY70452 Canola cytosol 9.38 57.28
CDY42565 Canola cytosol 9.38 57.28
CDY04821 Canola mitochondrion, plasma membrane 55.48 54.96
CDY38158 Canola cytosol, plasma membrane 26.07 54.3
KXG20551 Sorghum plasma membrane, plastid 64.07 53.52
CDY10980 Canola cytosol 13.83 48.88
CDY62642 Canola cytosol, plasma membrane, plastid 10.65 47.86
CDY22565 Canola nucleus 8.43 46.49
CDY38157 Canola mitochondrion 27.34 46.49
TraesCS6A01G310600.1 Wheat cytosol 26.55 44.06
TraesCS7A01G436000.1 Wheat mitochondrion 14.15 42.18
GSMUA_Achr7P03630_001 Banana plasma membrane 57.71 35.87
HORVU2Hr1G099640.3 Barley extracellular 17.33 16.95
Protein Annotations
Gene3D:2.10.25.10MapMan:22.5.2.1Gene3D:3.50.30.30GO:A0A078I250UniProt:A0A078I250EnsemblPlants:CDY43178
ProteinID:CDY43178ProteinID:CDY43178.1InterPro:EGF-like_Ca-bd_domInterPro:EGF_Ca-bd_CSGO:GO:0003674GO:GO:0005488
GO:GO:0005509GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00076174001InterPro:PA_domain
PFAM:PF02225ScanProsite:PS01187PANTHER:PTHR22765PANTHER:PTHR22765:SF56SMART:SM00179SUPFAM:SSF52025
TMHMM:TMhelixUniParc:UPI0004EE9561::::
Description
BnaCnng11060DBnaCnng11060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I250]
Coordinates
chrLK032547:-:233558..237105
Molecular Weight (calculated)
69621.7 Da
IEP (calculated)
5.041
GRAVY (calculated)
-0.329
Length
629 amino acids
Sequence
(BLAST)
001: MSLINKGATL ALFLALTMVF NGVFGRFIVE KSSVTILSPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAFGCDSFD KSFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ KSGAAAVLIA DNVDESLITM DSPEESKEAD DFIEKLTIPS ALIDLSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHRVG KEINKSWVWW
301: DYVTDFHIRC SMKEKKYTKE CAESVVESLG LPLDKIKKCM GDPAADVENE VLKGEQALQV GQGDRGDVTI LPTLIINNAQ YRGKLESSSV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWQDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SMNQGGCWSE TKKGLTFSAC SNTETSGCRC
501: PSGFKGDGLK CEDIDECKEK SACQCDGCKC NNKWGSFECK CSGNRLYMKE QDTCIEKSGS GIGWFFTFVI LAAVGGICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QQLRLTSAA
Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)
001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A
Arabidopsis Description
VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.