CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane

Predictor Summary:

plastid 1
extracellular 2
golgi 2
plasma membrane 3
endoplasmic reticulum 2
vacuole 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62642	Canola	cytosol, plasma membrane, plastid	42.72	92.14
CDY62643	Canola	mitochondrion	24.83	78.95
CDY70452	Canola	cytosol	24.17	70.87
CDY42565	Canola	cytosol	24.17	70.87
CDX99194	Canola	cytosol	24.17	70.87
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	34.44	58.43
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	9.6	50.0
CDY10980	Canola	cytosol	26.82	45.51
CDY04821	Canola	mitochondrion, plasma membrane	90.07	42.83
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	85.76	40.41
CDY12449	Canola	cytosol	37.75	39.31
Zm00001d053767_P001	Maize	mitochondrion	16.89	36.43
PGSC0003DMT400077180	Potato	cytosol	64.9	32.45
Solyc10g074980.1.1	Tomato	extracellular	64.9	31.41
PGSC0003DMT400080213	Potato	plasma membrane	64.57	31.25
CDX93144	Canola	extracellular, plasma membrane, vacuole	62.58	30.98
Solyc09g015670.2.1	Tomato	plastid	63.58	30.92
CDX73599	Canola	plasma membrane	63.58	30.72
CDX91478	Canola	plasma membrane	62.91	30.65
CDY60753	Canola	plasma membrane	62.91	30.65
CDX78128	Canola	plasma membrane	63.24	30.56
CDY37219	Canola	extracellular, golgi, plasma membrane	62.58	30.29
CDY65441	Canola	plasma membrane	63.24	30.27
CDX67539	Canola	plasma membrane	62.58	30.24
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	61.92	30.21
CDX81459	Canola	plasma membrane	62.25	30.13
CDY13344	Canola	plasma membrane	62.25	30.08
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	61.92	29.97
KRH48733	Soybean	extracellular, golgi, plasma membrane	60.93	29.58
KRH40723	Soybean	extracellular, golgi, plasma membrane	60.26	29.17
CDY43178	Canola	plasma membrane	54.3	26.07
CDY02347	Canola	plasma membrane	53.97	25.91
CDY50060	Canola	plasma membrane	52.65	25.28
CDX78975	Canola	plasma membrane	52.65	25.2
CDY64650	Canola	plasma membrane	49.34	23.73
CDY43647	Canola	plasma membrane	49.01	23.57
CDY22565	Canola	nucleus	4.97	13.16
CDY38157	Canola	mitochondrion	6.62	5.41

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	GO:A0A078HMX1	UniProt:A0A078HMX1	EnsemblPlants:CDY38158	ProteinID:CDY38158
ProteinID:CDY38158.1	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00065458001	ScanProsite:PS01187	PANTHER:PTHR22765
PANTHER:PTHR22765:SF54	SMART:SM00179	TMHMM:TMhelix	UniParc:UPI0004EF1301	SEG:seg	:

Description

BnaA07g02250DBnaA07g02250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMX1]

Coordinates

chrLK032417:+:203819..209818

Molecular Weight (calculated)

33836.7 Da

IEP (calculated)

7.606

GRAVY (calculated)

-0.349

Length

302 amino acids

Sequence
(BLAST)

001: MNDHPREISI VLRVYIHLVN ILIRLKTSSI LIEKTESSVG KGSRGDVTIL PTIMINNRQY RGKLERSVVL KALCSGFRET TEPPICLTED IETNECLQNN
101: GGCWEDKTTN ITACMDTFRG RVCQCPIVEG VKFLGDGYTH WEASGALRCG INNGGCWKHT QMGRTYSACR DDHSKGCKCP PGFKRDGLKN CEDVNECEEK
201: TACQCRGCKC KNTWGSYECS CSGSLLYIRE HDICISKDAR GDVSWGVIWI ILMGLGAAAL GAYTVYKYRI RTYMDSEIRA IMAQYMPLDN HPNTQPSSQL
301: EL

Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)

001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA

Arabidopsis Description

VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.