CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48733	Soybean	extracellular, golgi, plasma membrane	93.91	94.21
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	77.4	78.03
KRH40723	Soybean	extracellular, golgi, plasma membrane	76.28	76.28
PGSC0003DMT400077180	Potato	cytosol	70.67	73.01
PGSC0003DMT400080213	Potato	plasma membrane	71.47	71.47
Solyc10g074980.1.1	Tomato	extracellular	71.15	71.15
Solyc09g015670.2.1	Tomato	plastid	70.51	70.85
CDY62643	Canola	mitochondrion	10.74	70.53
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	60.9	68.84
CDY04821	Canola	mitochondrion, plasma membrane	67.95	66.77
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	67.47	65.68
KRG91109	Soybean	endoplasmic reticulum	62.66	61.97
KRH27575	Soybean	endoplasmic reticulum	62.34	61.94
CDY38158	Canola	cytosol, plasma membrane	29.97	61.92
KRH35666	Soybean	endoplasmic reticulum	62.5	61.81
KRH77935	Soybean	endoplasmic reticulum	62.02	60.19
CDY38157	Canola	mitochondrion	35.26	59.46
CDY42565	Canola	cytosol	9.78	59.22
CDY70452	Canola	cytosol	9.78	59.22
CDX99194	Canola	cytosol	9.78	59.22
Bra039875.1-P	Field mustard	cytosol	9.78	59.22
CDY62642	Canola	cytosol, plasma membrane, plastid	13.14	58.57
KRH12166	Soybean	plasma membrane	58.49	58.12
KRH37180	Soybean	plasma membrane	57.69	57.69
Bra039898.1-P	Field mustard	cytosol	33.81	55.09
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	14.9	52.25
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	4.81	51.72
CDY10980	Canola	cytosol	13.62	47.75
Zm00001d053767_P001	Maize	mitochondrion	9.29	41.43
VIT_11s0052g00060.t01	Wine grape	extracellular	9.13	37.25

Protein Annotations

EntrezGene:100807869	Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	EMBL:ACUP02001299
InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	EnsemblPlantsGene:GLYMA_03G002800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:I1JK09	EnsemblPlants:KRH64888	ProteinID:KRH64888
ProteinID:KRH64888.1	InterPro:PA_domain	PFAM:PF02225	ScanProsite:PS01187	PANTHER:PTHR22765	PANTHER:PTHR22765:SF58
SMART:SM00179	SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233A938	:

Description

hypothetical protein

Coordinates

chr3:+:263773..270060

Molecular Weight (calculated)

69254.1 Da

IEP (calculated)

5.649

GRAVY (calculated)

-0.369

Length

624 amino acids

Sequence
(BLAST)

001: MTMRTKQSCF WCLWILLCGS CVGRFVVEKN NLKITSPKSL RGIYECAIGN FGVPKYGGTM IGSVVYPKSN QNGCRNFDAS LSSKPGTFPT FVLVDRGDCY
101: FTLKAWNAQK GGAAAILVAD NRIEPLITMD TPEEGNGAKD DDYIEKINIP SALISKSLGD NIKQALSSGA MVNVNLDWRE ALPHPDERVE YEFWTSSNDE
201: CGPKCESEIN FVKSFKGAAQ LLEQKGFAKF TPHYITWYCP EAFLLSQQCK SQCINNGRYC APDPELDFKR GYNGRDVVIQ NLRQACFFKV ANESRKPWQW
301: WDYVTDFSIR CPMRENKYTE ECSDQVIKSL GVDLKKVKDC VGDPSANAGN AVLNAEQDAQ IGNDDRGDVT ILPTLIINNR QYRGKLSRAA VLKAICSGFQ
401: ETTEPSICLT PDMETNECLQ NNGGCWQDKA SNITACRDTF RGRVCECPII QNVQFVGDGY THCEATGTLR CAINNGGCWK ETRGSRSYSA CIDGHTKGCK
501: CPPGFRGDGA NSCEDVDECK EKLACQCPEC QCKNTWGSYE CSCSDGLFYA RENDMCIGKY AASMAGGGIV WLVILVLGIA GTGVYAFYKY RIQRYMDSEI
601: RAIMAQYMPL DNQPEISSQA HEGV

Best Arabidopsis Sequence Match ( AT2G30290.2 )
(BLAST)

001: MRTTNVWLVV IVWVTVGWSS CTGRFVVEKN NLRVTSPESI RGVYECALGN FGVPQYGGSM SGAVVYPKTN QKACKNFDDF EISFRSRVAG LPTFVLVDRG
101: DCYFTLKAWN AQRAGAATIL VADNRPEQLI TMDAPEDETS DADYLQNITI PSALVSRSLG SAIKTAIAHG DPVHISLDWR EALPHPNDRV AYELWTNSND
201: ECGSKCDAQI RFLKRFKGAA QILEKGGYTR FTPHYITWYC PEAFLASRQC KTQCINGGRY CAPDPEQDFS RGYNGKDVII QNLRQACFFR VTNESGKPWL
301: WWDYVTDFAI RCPMKEEKYN KKCADQVIQS LGVDVKKIDK CIGDIDANAE NPVLKEEQVA QVGKGSRGDV TILPTIVINN RQYRGKLQRS AVLKALCSGF
401: RETTEPPICL TEDIETNECL QNNGGCWEDK TTNITACRDT FRGRVCQCPI VQGVKFLGDG YTHCEASGAL RCGINNGGCW KQTQMGKTYS ACRDDHSKGC
501: KCPPGFIGDG LKECKDVNEC EEKTACQCRD CKCKNTWGSY ECSCSGSLLY IREHDICINR DARGDFSWGV IWIIIMGLGA AALGAYTVYK YRIRTYMDSE
601: IRAIMAQYMP LDNNPNTQLS SQLELENAKY VESDFNLFLL S

Arabidopsis Description

VSR2VACUOLAR SORTING RECEPTOR 2 [Source:UniProtKB/TrEMBL;Acc:F4IMR9]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.