CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, plasma membrane

Predictor Summary:

extracellular 6
golgi 7
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	94.21	93.91
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	78.14	78.51
KRH40723	Soybean	extracellular, golgi, plasma membrane	76.69	76.44
PGSC0003DMT400077180	Potato	cytosol	72.03	74.17
PGSC0003DMT400080213	Potato	plasma membrane	72.51	72.28
Solyc09g015670.2.1	Tomato	plastid	71.86	71.98
Solyc10g074980.1.1	Tomato	extracellular	72.19	71.96
CDY62643	Canola	mitochondrion	10.61	69.47
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	61.09	68.84
CDY04821	Canola	mitochondrion, plasma membrane	67.68	66.3
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	67.2	65.21
KRG91109	Soybean	endoplasmic reticulum	63.5	62.6
KRH35666	Soybean	endoplasmic reticulum	63.5	62.6
KRH27575	Soybean	endoplasmic reticulum	62.7	62.1
CDY38158	Canola	cytosol, plasma membrane	29.58	60.93
KRH77935	Soybean	endoplasmic reticulum	62.7	60.65
CDY38157	Canola	mitochondrion	35.37	59.46
CDY42565	Canola	cytosol	9.81	59.22
CDY70452	Canola	cytosol	9.81	59.22
CDX99194	Canola	cytosol	9.81	59.22
Bra039875.1-P	Field mustard	cytosol	9.81	59.22
CDY62642	Canola	cytosol, plasma membrane, plastid	13.18	58.57
KRH12166	Soybean	plasma membrane	58.36	57.8
KRH37180	Soybean	plasma membrane	57.72	57.53
Bra039898.1-P	Field mustard	cytosol	34.08	55.35
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	15.11	52.81
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	4.66	50.0
CDY10980	Canola	cytosol	13.67	47.75
Zm00001d053767_P001	Maize	mitochondrion	9.32	41.43
VIT_11s0052g00060.t01	Wine grape	extracellular	9.16	37.25

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.50.30.30	EMBL:ACUP02004270	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS
EnsemblPlantsGene:GLYMA_07G108300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	UniProt:K7L1C2	EnsemblPlants:KRH48733	ProteinID:KRH48733	ProteinID:KRH48733.1	InterPro:PA_domain
PFAM:PF02225	ScanProsite:PS01187	PANTHER:PTHR22765	PANTHER:PTHR22765:SF58	SMART:SM00179	SUPFAM:SSF52025
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002338AAB	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:10645636..10651335

Molecular Weight (calculated)

69209.8 Da

IEP (calculated)

5.144

GRAVY (calculated)

-0.386

Length

622 amino acids

Sequence
(BLAST)

001: MRAKQNFLWC VWILLCGSCV GRFVVEKNNL KITSPKSLRG IYECAIGNFG VPKYGGTMIG SVVYPKSNQN GCRNFDASLS SKPGTFPTFV LVDRGDCYFT
101: LKAWNAQKGG AAAILVADNR EEPLITMDTP EEGNGAKDDD YIEKISIPSA LISKSLGDKI KQALSSGAMV NVNLDWREAL PHPDERVEYE FWTSSNDECG
201: PKCESEINFV KSFKGAAQLL EQKGFTKFTP HYITWYCPEA FILSQQCKSQ CINNGRYCAP DPELHFQRGY NGRDVVIQNL RQACFFKVAN ESGKPWQWWD
301: YVTDFSIRCP MRENKYTEEC SDQVIKSLGV DLKEIKDCVG NPSANADNPV LNAEQDAQIG NNDRGDVTIL PTLIINSRQY RGKLSKAAVL KAICSGFQET
401: TEPSICLTPD METNECLQNN GGCWQDKAAN ITACRDTFRG RVCECPIIQN VQFVGDGYTH CEATGALRCA INNGGCWKET QGSRSYSACI DDHTKGCKCP
501: PGFRGDGVHS CEDVDECKEK LVCQCPECQC KNTWGSYECT CSDDLFYTRE NDMCIGKYAA SVAGGGIVWM VILVLGIAGT SGYAFYKYRI QRYMDSEIRA
601: IMAQYMPLDN QPEISSQAHE DV

Best Arabidopsis Sequence Match ( AT3G52850.1 )
(BLAST)

001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI

Arabidopsis Description

VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [extracellular,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.