Factsheet for Bra028917.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04821	Canola	mitochondrion, plasma membrane	99.28	86.3
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	92.39	79.56
Bra039898.1-P	Field mustard	cytosol	51.09	73.63
Bra039875.1-P	Field mustard	cytosol	12.86	68.93
PGSC0003DMT400077180	Potato	cytosol	73.55	67.22
PGSC0003DMT400080213	Potato	plasma membrane	74.28	65.71
Solyc10g074980.1.1	Tomato	extracellular	73.73	65.22
Solyc09g015670.2.1	Tomato	plastid	72.28	64.25
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	70.47	62.84
Bra028535.1-P	Field mustard	plasma membrane	70.83	62.56
KRH40723	Soybean	extracellular, golgi, plasma membrane	69.2	61.22
KRH48733	Soybean	extracellular, golgi, plasma membrane	68.84	61.09
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	68.84	60.9
Bra006952.1-P	Field mustard	plasma membrane	70.47	60.88
Bra005096.1-P	Field mustard	plasma membrane	68.3	60.81
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	67.75	59.94
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	68.12	59.59
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	5.25	50.0
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	16.12	50.0
Bra023151.1-P	Field mustard	plasma membrane	56.88	49.92
Bra013445.1-P	Field mustard	plasma membrane	56.52	49.45
Bra039877.1-P	Field mustard	cytosol	29.17	48.79
Bra021940.1-P	Field mustard	plasma membrane	52.54	46.25
Zm00001d053767_P001	Maize	mitochondrion	5.98	23.57

Protein Annotations

EnsemblPlants:Bra028917.1	EnsemblPlants:Bra028917.1-P	EnsemblPlantsGene:Bra028917	Gene3D:3.50.30.30	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:EGF-like_CS	InterPro:PA_domain	PANTHER:PTHR22765	PANTHER:PTHR22765:SF54	PFAM:PF02225
ScanProsite:PS01186	SEG:seg	SUPFAM:SSF52025	TMHMM:TMhelix	UniParc:UPI00025435C0	UniProt:M4EJF1
MapMan:22.5.2.1	:	:	:	:	:

Description

AT2G30290 (E=9e-200) | vacuolar sorting receptor, putative

Coordinates

chrA02:+:1402971..1405766

Molecular Weight (calculated)

61553.1 Da

IEP (calculated)

7.509

GRAVY (calculated)

-0.424

Length

552 amino acids

Sequence
(BLAST)

001: MGRFVVEKNS LRVTSAEFIR GIYECALGNF GVPQYGGSMS GSVVYPKANQ KACKNFEDFD ISFRSRVSGL PTFVLVDRGD CYFTLKAWNA QRAGAATILV
101: ADNRPEPLIT MDAPEDETAD AEYLQNITIP SALLSRSLGS AIKTAINQGE PALPHPNDRV AYELWTNSND ECGSKCDAQI RFLKRFKGAA QILEKGGYTR
201: FTPHYITWYC PEAFLASRQC KSQCINGGRY CAPDPEQDFS RGYNGRDVII QNLRQACFFR VMNESGKPWI WWDYVTDFAI RCPMKHEKYN KQCADQVIRS
301: LGVDVNKIDK CIGDIEANTE NPVLRDEQEA QVGKGSRGDV TILPTIVINN RQYRGKLERS AVLKALCSGF RETTEPPICL TEDIETNECL QNNGGCWEDK
401: TTNITACRDT FRGRVCQCPI VQGVKFLGDG YTHCEASGAL RCGINNGGCW KHTQMGRTYS ACRDDHSKGC KCPPGFKGDG LKNCEGKDAR GDVSWGVIWI
501: ILMGLGAAAL GAYTVYKYRI RTYMDSEIRA IMAQYMPLDN HPNTQPSSQL EL

Best Arabidopsis Sequence Match ( AT2G30290.2 )
(BLAST)

001: MRTTNVWLVV IVWVTVGWSS CTGRFVVEKN NLRVTSPESI RGVYECALGN FGVPQYGGSM SGAVVYPKTN QKACKNFDDF EISFRSRVAG LPTFVLVDRG
101: DCYFTLKAWN AQRAGAATIL VADNRPEQLI TMDAPEDETS DADYLQNITI PSALVSRSLG SAIKTAIAHG DPVHISLDWR EALPHPNDRV AYELWTNSND
201: ECGSKCDAQI RFLKRFKGAA QILEKGGYTR FTPHYITWYC PEAFLASRQC KTQCINGGRY CAPDPEQDFS RGYNGKDVII QNLRQACFFR VTNESGKPWL
301: WWDYVTDFAI RCPMKEEKYN KKCADQVIQS LGVDVKKIDK CIGDIDANAE NPVLKEEQVA QVGKGSRGDV TILPTIVINN RQYRGKLQRS AVLKALCSGF
401: RETTEPPICL TEDIETNECL QNNGGCWEDK TTNITACRDT FRGRVCQCPI VQGVKFLGDG YTHCEASGAL RCGINNGGCW KQTQMGKTYS ACRDDHSKGC
501: KCPPGFIGDG LKECKDVNEC EEKTACQCRD CKCKNTWGSY ECSCSGSLLY IREHDICINR DARGDFSWGV IWIIIMGLGA AALGAYTVYK YRIRTYMDSE
601: IRAIMAQYMP LDNNPNTQLS SQLELENAKY VESDFNLFLL S

Arabidopsis Description

VSR2VACUOLAR SORTING RECEPTOR 2 [Source:UniProtKB/TrEMBL;Acc:F4IMR9]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.