CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, plasma membrane

Predictor Summary:

extracellular 6
golgi 7
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	95.67	96.45
KRH48733	Soybean	extracellular, golgi, plasma membrane	76.44	76.69
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	76.28	76.28
PGSC0003DMT400077180	Potato	cytosol	72.92	75.33
Solyc09g015670.2.1	Tomato	plastid	72.28	72.62
Solyc10g074980.1.1	Tomato	extracellular	72.28	72.28
PGSC0003DMT400080213	Potato	plasma membrane	72.12	72.12
CDY62643	Canola	mitochondrion	10.58	69.47
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	61.22	69.2
CDY04821	Canola	mitochondrion, plasma membrane	67.95	66.77
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	67.47	65.68
KRG91109	Soybean	endoplasmic reticulum	66.19	65.45
KRH35666	Soybean	endoplasmic reticulum	66.03	65.29
KRH27575	Soybean	endoplasmic reticulum	64.9	64.49
KRH77935	Soybean	endoplasmic reticulum	65.22	63.3
CDY38158	Canola	cytosol, plasma membrane	29.17	60.26
CDY38157	Canola	mitochondrion	35.26	59.46
KRH37180	Soybean	plasma membrane	59.46	59.46
KRH12166	Soybean	plasma membrane	59.62	59.24
CDY62642	Canola	cytosol, plasma membrane, plastid	12.98	57.86
CDY42565	Canola	cytosol	9.46	57.28
CDY70452	Canola	cytosol	9.46	57.28
CDX99194	Canola	cytosol	9.46	57.28
Bra039875.1-P	Field mustard	cytosol	9.46	57.28
Bra039898.1-P	Field mustard	cytosol	33.49	54.57
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	14.74	51.69
CDY10980	Canola	cytosol	13.78	48.31
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	4.49	48.28
Zm00001d053767_P001	Maize	mitochondrion	9.62	42.86
VIT_11s0052g00060.t01	Wine grape	extracellular	9.62	39.22

Protein Annotations

EntrezGene:100806422	Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.50.30.30	EMBL:ACUP02006049	InterPro:EGF-like_Ca-bd_dom
InterPro:EGF_Ca-bd_CS	EnsemblPlantsGene:GLYMA_09G274300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	UniProt:I1L6Z9	EnsemblPlants:KRH40723	ProteinID:KRH40723	ProteinID:KRH40723.1
InterPro:PA_domain	PFAM:PF02225	PFAM:PF12662	ScanProsite:PS01187	PFscan:PS51257	PANTHER:PTHR22765
PANTHER:PTHR22765:SF58	SMART:SM00179	SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00023C8D57
InterPro:cEGF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:49026458..49032623

Molecular Weight (calculated)

69211.9 Da

IEP (calculated)

5.139

GRAVY (calculated)

-0.353

Length

624 amino acids

Sequence
(BLAST)

001: MGTTKLSLLL CVGVLLLGCC VGRFVVEKNS LKVTSPKSLK GTYECAIGNF GVPKYGGTLV GSVLYPKVNQ KGCTNFSDVN FQSKPGGFPT FLLVDRGDCY
101: FTLKAWNAQN GGAAAILVAD DKAETLITMD TPEEGKANDD YVDKISIPSA LISKSLGDSI KQALSDGEMV NINLDWRESL PHPDDRVEYE LWTNSNDECG
201: PKCDSLINFL KDFKGVAQQL EKKGFTQFTP RYITWFCPEA FLLSKQCKSQ CINNGRYCAP DPEQDFSRGY DGKDVVVQNL RQACFYKVAN ESGKPWQWWD
301: YVTDFAIRCP MKENKYSEEC SDQVIKSLGA DLKKIKDCVG DPHADVENPV LKAEQDAQIG QGSRGDVTIL PTLVINNRQY RGKLSRPSVL KAICSGYLET
401: TEPSICLTSD LETNECLENN GGCWQDKSSN ITACRDTFRG RVCECPIVQN VKFFGDGYTH CEASGSLSCE FNNGGCWKGA QGGRAYSACL DDYRKGCTCP
501: PGFRGDGVQS CEDIDECNEK TSCQCPGCKC KNTWGSYECK CKSGLFYSRE NDTCFGEYSA SVLNIWVIIL VLVVAVAGGY AFYKYRIQLI YVQRYMDSEI
601: RTIMAQYMPL DSQPDVSNQV HHNI

Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)

001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA

Arabidopsis Description

VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.