Factsheet for Bra009645.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 1
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	14.04	43.1
CDY38158	Canola	cytosol, plasma membrane	58.43	34.44
Zm00001d053767_P001	Maize	mitochondrion	25.28	32.14
Bra039875.1-P	Field mustard	cytosol	17.42	30.1
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	64.61	17.94
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	50.0	16.12
PGSC0003DMT400077180	Potato	cytosol	52.81	15.56
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.81	15.19
KRH48733	Soybean	extracellular, golgi, plasma membrane	52.81	15.11
Solyc10g074980.1.1	Tomato	extracellular	52.81	15.06
Solyc09g015670.2.1	Tomato	plastid	52.25	14.98
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.25	14.9
PGSC0003DMT400080213	Potato	plasma membrane	52.25	14.9
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	52.25	14.9
KRH40723	Soybean	extracellular, golgi, plasma membrane	51.69	14.74
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.25	14.74
Bra006952.1-P	Field mustard	plasma membrane	52.25	14.55
Bra028535.1-P	Field mustard	plasma membrane	50.56	14.4
Bra005096.1-P	Field mustard	plasma membrane	50.0	14.35
Bra039877.1-P	Field mustard	cytosol	25.28	13.64
Bra023151.1-P	Field mustard	plasma membrane	44.94	12.72
Bra013445.1-P	Field mustard	plasma membrane	42.7	12.04
Bra021940.1-P	Field mustard	plasma membrane	41.57	11.8
Bra039898.1-P	Field mustard	cytosol	7.3	3.39

Protein Annotations

EnsemblPlants:Bra009645.1	EnsemblPlants:Bra009645.1-P	EnsemblPlantsGene:Bra009645	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR22765	PANTHER:PTHR22765:SF47	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002547EF7	UniProt:M4CZJ8
MapMan:35.1	:	:	:	:	:

Description

AT2G30290 (E=9e-040) | vacuolar sorting receptor, putative

Coordinates

chrA10:-:17581924..17583502

Molecular Weight (calculated)

19846.8 Da

IEP (calculated)

7.911

GRAVY (calculated)

-0.443

Length

178 amino acids

Sequence
(BLAST)

001: MSRGQMLKKG SEGSQSSRRG DALFGLKDKL LGGGPYDLVG SLQPHAVVPS NDIETNECLQ NNGGCWVDKR TNITACRCEE KTVCQCRGCK CKNTWGSYDA
101: LPLYIREQDI CISKDARGDV RWGVIWIIIM GLGAAALGAY TDYKYRIRTY MDSEIRAIMA QYMPLDNHPN TQPSQLEL

Best Arabidopsis Sequence Match ( AT2G30290.1 )
(BLAST)

001: MRTTNVWLVV IVWVTVGWSS CTGRFVVEKN NLRVTSPESI RGVYECALGN FGVPQYGGSM SGAVVYPKTN QKACKNFDDF EISFRSRVAG LPTFVLVDRG
101: DCYFTLKAWN AQRAGAATIL VADNRPEQLI TMDAPEDETS DADYLQNITI PSALVSRSLG SAIKTAIAHG DPVHISLDWR EALPHPNDRV AYELWTNSND
201: ECGSKCDAQI RFLKRFKGAA QILEKGGYTR FTPHYITWYC PEAFLASRQC KTQCINGGRY CAPDPEQDFS RGYNGKDVII QNLRQACFFR VTNESGKPWL
301: WWDYVTDFAI RCPMKEEKYN KKCADQVIQS LGVDVKKIDK CIGDIDANAE NPVLKEEQVA QVGKGSRGDV TILPTIVINN RQYRGKLQRS AVLKALCSGF
401: RETTEPPICL TEDIETNECL QNNGGCWEDK TTNITACRDT FRGRVCQCPI VQGVKFLGDG YTHCEASGAL RCGINNGGCW KQTQMGKTYS ACRDDHSKGC
501: KCPPGFIGDG LKECKDVNEC EEKTACQCRD CKCKNTWGSY ECSCSGSLLY IREHDICINR DARGDFSWGV IWIIIMGLGA AALGAYTVYK YRIRTYMDSE
601: IRAIMAQYMP LDNNPNTQLS SQLEL

Arabidopsis Description

VSR2VACUOLAR SORTING RECEPTOR 2 [Source:UniProtKB/TrEMBL;Acc:F4IMR9]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.