CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40723	Soybean	extracellular, golgi, plasma membrane	96.45	95.67
KRH48733	Soybean	extracellular, golgi, plasma membrane	78.51	78.14
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	78.03	77.4
PGSC0003DMT400077180	Potato	cytosol	74.15	75.99
Solyc09g015670.2.1	Tomato	plastid	73.51	73.27
Solyc10g074980.1.1	Tomato	extracellular	73.83	73.24
PGSC0003DMT400080213	Potato	plasma membrane	73.67	73.08
CDY62643	Canola	mitochondrion	10.99	71.58
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	62.84	70.47
CDY04821	Canola	mitochondrion, plasma membrane	69.79	68.03
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	68.98	66.61
KRG91109	Soybean	endoplasmic reticulum	67.37	66.09
KRH35666	Soybean	endoplasmic reticulum	67.21	65.93
KRH27575	Soybean	endoplasmic reticulum	66.24	65.29
KRH77935	Soybean	endoplasmic reticulum	66.4	63.92
CDY38158	Canola	cytosol, plasma membrane	30.21	61.92
KRH37180	Soybean	plasma membrane	60.42	59.94
CDY38157	Canola	mitochondrion	35.7	59.73
KRH12166	Soybean	plasma membrane	60.58	59.71
CDY62642	Canola	cytosol, plasma membrane, plastid	13.41	59.29
CDY42565	Canola	cytosol	9.69	58.25
CDY70452	Canola	cytosol	9.69	58.25
CDX99194	Canola	cytosol	9.69	58.25
Bra039875.1-P	Field mustard	cytosol	9.69	58.25
Bra039898.1-P	Field mustard	cytosol	34.09	55.09
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	15.19	52.81
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	4.85	51.72
CDY10980	Canola	cytosol	14.38	50.0
Zm00001d053767_P001	Maize	mitochondrion	9.69	42.86
VIT_11s0052g00060.t01	Wine grape	extracellular	9.69	39.22

Protein Annotations

EntrezGene:100807514	Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	EMBL:ACUP02011443
InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	EnsemblPlantsGene:GLYMA_18G213400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Growth_fac_rcpt_cys_sf	UniProt:I1N383	EnsemblPlants:KRH00437
ProteinID:KRH00437	ProteinID:KRH00437.1	InterPro:PA_domain	PFAM:PF02225	PFAM:PF12662	ScanProsite:PS01187
PFscan:PS51257	PANTHER:PTHR22765	PANTHER:PTHR22765:SF54	SMART:SM00179	SUPFAM:SSF52025	SUPFAM:SSF57184
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233F56C	InterPro:cEGF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:50037003..50043647

Molecular Weight (calculated)

68661.6 Da

IEP (calculated)

5.476

GRAVY (calculated)

-0.335

Length

619 amino acids

Sequence
(BLAST)

001: MMGAKLGLLL CVCVLLLGCC VGRFVVEKNS LKVTSPKSLK GTYECAIGNF GVPKYGGTLV GSVLYPKVNQ KGCTNFSDVN FQSKPGGLPT FLLVDRGDCY
101: FTLKAWNAQN GGAAAILVAD DKAETLITMD TPEEGKANDD YVDKISIPSA LISKSLGDSI KQALSDGEMV NINLDWRESL PHPDDRVEYE LWTNSNDECG
201: PKCDSLINFL KDFKGVAQQL EKRGFTQFTP RYITWFCPEA FLLSRQCKSQ CINNGRYCAP DPEQDFSRGY DGKDVVVQNL RQACFYKVAN ESGKPWQWWD
301: YVTDFSIRCP MKENKYTEEC SDQVIKSLGV DLKKIKDCVG DPHADIENPV LKAEQDAQIG KGSRGDVTIL PTLVINNRQY RGKLSRPAVL KAICSGFLET
401: TEPSICLTSD LETNECLENN GGCWQDKSSN ITACRDTFRG RVCECPIVQN VKFVGDGYTH CEASGSLSCQ FNNGGCWKGV QGGRAYSACL DDYRKGCTCP
501: PGFRGDGVQS CEDIDECKEK TACQCPGCKC KNTWGSYECK CKSGLFYSRE NDTCFGEYSA SVLNIWVIIL VLVVAVAGGY AFYKYRIQRY MDSEIRAIMA
601: QYMPLDNQPE VSNQVHHNI

Best Arabidopsis Sequence Match ( AT3G52850.1 )
(BLAST)

001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI

Arabidopsis Description

VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.