CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70452	Canola	cytosol	48.42	44.66
CDX99194	Canola	cytosol	48.42	44.66
CDY42565	Canola	cytosol	48.42	44.66
CDY38158	Canola	cytosol, plasma membrane	78.95	24.83
CDY10980	Canola	cytosol	42.11	22.47
CDY12449	Canola	cytosol	42.11	13.79
CDY04821	Canola	mitochondrion, plasma membrane	83.16	12.44
PGSC0003DMT400077180	Potato	cytosol	71.58	11.26
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	71.58	10.99
Solyc09g015670.2.1	Tomato	plastid	70.53	10.79
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	70.53	10.74
CDX93144	Canola	extracellular, plasma membrane, vacuole	68.42	10.66
KRH48733	Soybean	extracellular, golgi, plasma membrane	69.47	10.61
PGSC0003DMT400080213	Potato	plasma membrane	69.47	10.58
KRH40723	Soybean	extracellular, golgi, plasma membrane	69.47	10.58
CDY13344	Canola	plasma membrane	69.47	10.56
CDX67539	Canola	plasma membrane	69.47	10.56
Solyc10g074980.1.1	Tomato	extracellular	68.42	10.42
CDX78128	Canola	plasma membrane	68.42	10.4
CDX73599	Canola	plasma membrane	68.42	10.4
CDY65441	Canola	plasma membrane	68.42	10.3
CDX91478	Canola	plasma membrane	66.32	10.16
CDY60753	Canola	plasma membrane	66.32	10.16
CDY37219	Canola	extracellular, golgi, plasma membrane	66.32	10.1
CDX81459	Canola	plasma membrane	66.32	10.1
CDY43178	Canola	plasma membrane	65.26	9.86
CDY02347	Canola	plasma membrane	65.26	9.86
CDY64650	Canola	plasma membrane	62.11	9.39
CDY50060	Canola	plasma membrane	62.11	9.38
CDY43647	Canola	plasma membrane	61.05	9.24
CDX78975	Canola	plasma membrane	60.0	9.03
Zm00001d053767_P001	Maize	mitochondrion	7.37	5.0
CDY22565	Canola	nucleus	5.26	4.39
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	1.05	1.72
CDY38157	Canola	mitochondrion	5.26	1.35
CDY62642	Canola	cytosol, plasma membrane, plastid	1.05	0.71

Protein Annotations

EnsemblPlants:CDY62643	EnsemblPlantsGene:GSBRNA2T00036485001	PANTHER:PTHR22765	PANTHER:PTHR22765:SF56	ProteinID:CDY62643	ProteinID:CDY62643.1
UniParc:UPI0004EE3E01	UniProt:A0A078JAS2	MapMan:35.1	:	:	:

Description

BnaCnng40700DBnaCnng40700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAS2]

Coordinates

chrLK034173:-:32808..33605

Molecular Weight (calculated)

10505.7 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.322

Length

95 amino acids

Sequence
(BLAST)

1: MASLLTNFGK LERSAVLKAL CSGFRGTTEP PICLTEDIET NECLQNNGGC WVDKRTNITA CRDTFRGRVC RCPIVQGVKF LGDGYTHCEG MKNRS

Best Arabidopsis Sequence Match ( AT2G30290.1 )
(BLAST)

001: MRTTNVWLVV IVWVTVGWSS CTGRFVVEKN NLRVTSPESI RGVYECALGN FGVPQYGGSM SGAVVYPKTN QKACKNFDDF EISFRSRVAG LPTFVLVDRG
101: DCYFTLKAWN AQRAGAATIL VADNRPEQLI TMDAPEDETS DADYLQNITI PSALVSRSLG SAIKTAIAHG DPVHISLDWR EALPHPNDRV AYELWTNSND
201: ECGSKCDAQI RFLKRFKGAA QILEKGGYTR FTPHYITWYC PEAFLASRQC KTQCINGGRY CAPDPEQDFS RGYNGKDVII QNLRQACFFR VTNESGKPWL
301: WWDYVTDFAI RCPMKEEKYN KKCADQVIQS LGVDVKKIDK CIGDIDANAE NPVLKEEQVA QVGKGSRGDV TILPTIVINN RQYRGKLQRS AVLKALCSGF
401: RETTEPPICL TEDIETNECL QNNGGCWEDK TTNITACRDT FRGRVCQCPI VQGVKFLGDG YTHCEASGAL RCGINNGGCW KQTQMGKTYS ACRDDHSKGC
501: KCPPGFIGDG LKECKDVNEC EEKTACQCRD CKCKNTWGSY ECSCSGSLLY IREHDICINR DARGDFSWGV IWIIIMGLGA AALGAYTVYK YRIRTYMDSE
601: IRAIMAQYMP LDNNPNTQLS SQLEL

Arabidopsis Description

VSR2VACUOLAR SORTING RECEPTOR 2 [Source:UniProtKB/TrEMBL;Acc:F4IMR9]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.