CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99194	Canola	cytosol	50.0	86.41
CDY42565	Canola	cytosol	50.0	86.41
CDY70452	Canola	cytosol	50.0	86.41
Bra039875.1-P	Field mustard	cytosol	50.0	86.41
CDY62643	Canola	mitochondrion	22.47	42.11
CDY38158	Canola	cytosol, plasma membrane	45.51	26.82
CDY12449	Canola	cytosol	33.71	20.69
CDY04821	Canola	mitochondrion, plasma membrane	62.92	17.64
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	59.55	16.54
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	50.0	14.38
PGSC0003DMT400077180	Potato	cytosol	48.31	14.24
PGSC0003DMT400080213	Potato	plasma membrane	49.44	14.1
CDX67539	Canola	plasma membrane	49.44	14.08
CDX93144	Canola	extracellular, plasma membrane, vacuole	47.75	13.93
CDX73599	Canola	plasma membrane	48.88	13.92
CDX78128	Canola	plasma membrane	48.88	13.92
CDY13344	Canola	plasma membrane	48.88	13.92
Solyc09g015670.2.1	Tomato	plastid	48.31	13.85
CDY43178	Canola	plasma membrane	48.88	13.83
CDY02347	Canola	plasma membrane	48.88	13.83
CDY37219	Canola	extracellular, golgi, plasma membrane	48.31	13.78
Solyc10g074980.1.1	Tomato	extracellular	48.31	13.78
KRH40723	Soybean	extracellular, golgi, plasma membrane	48.31	13.78
CDX81459	Canola	plasma membrane	48.31	13.78
KRH48733	Soybean	extracellular, golgi, plasma membrane	47.75	13.67
CDY65441	Canola	plasma membrane	48.31	13.63
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	47.75	13.62
CDY60753	Canola	plasma membrane	47.19	13.55
CDY50060	Canola	plasma membrane	47.75	13.51
CDX78975	Canola	plasma membrane	47.75	13.47
CDX91478	Canola	plasma membrane	46.63	13.39
CDY62642	Canola	cytosol, plasma membrane, plastid	10.11	12.86
CDY43647	Canola	plasma membrane	44.38	12.58
CDY64650	Canola	plasma membrane	43.82	12.42
Zm00001d053767_P001	Maize	mitochondrion	6.18	7.86
CDY22565	Canola	nucleus	3.93	6.14
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	1.12	3.45
CDY38157	Canola	mitochondrion	3.37	1.62

Protein Annotations

EnsemblPlants:CDY10980	EnsemblPlantsGene:GSBRNA2T00048921001	PANTHER:PTHR22765	PANTHER:PTHR22765:SF56	ProteinID:CDY10980	ProteinID:CDY10980.1
SEG:seg	UniParc:UPI0004EE6E7A	UniProt:A0A078F916	MapMan:35.1	:	:

Description

BnaA03g46390DBnaA03g46390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F916]

Coordinates

chrLK032008:-:464817..466877

Molecular Weight (calculated)

19922.7 Da

IEP (calculated)

7.358

GRAVY (calculated)

-0.551

Length

178 amino acids

Sequence
(BLAST)

001: MKQENYNKIY VFQVGVDVNK IDKFIGDIKA NTENHVFRGE QEAQVGKGSR GDVTILPTIV INNKQPRGER SKDVLLERSM VLKDFCSGFS ETTEPHICLN
101: KDIETNECLQ NNGGCWDQHY SLQGHFQRKS MSMSCCSRCQ VLGEVVAAVQ YDHSKGCKCP PGLKGVGLKY TVCESHDS

Best Arabidopsis Sequence Match ( AT2G30290.1 )
(BLAST)

001: MRTTNVWLVV IVWVTVGWSS CTGRFVVEKN NLRVTSPESI RGVYECALGN FGVPQYGGSM SGAVVYPKTN QKACKNFDDF EISFRSRVAG LPTFVLVDRG
101: DCYFTLKAWN AQRAGAATIL VADNRPEQLI TMDAPEDETS DADYLQNITI PSALVSRSLG SAIKTAIAHG DPVHISLDWR EALPHPNDRV AYELWTNSND
201: ECGSKCDAQI RFLKRFKGAA QILEKGGYTR FTPHYITWYC PEAFLASRQC KTQCINGGRY CAPDPEQDFS RGYNGKDVII QNLRQACFFR VTNESGKPWL
301: WWDYVTDFAI RCPMKEEKYN KKCADQVIQS LGVDVKKIDK CIGDIDANAE NPVLKEEQVA QVGKGSRGDV TILPTIVINN RQYRGKLQRS AVLKALCSGF
401: RETTEPPICL TEDIETNECL QNNGGCWEDK TTNITACRDT FRGRVCQCPI VQGVKFLGDG YTHCEASGAL RCGINNGGCW KQTQMGKTYS ACRDDHSKGC
501: KCPPGFIGDG LKECKDVNEC EEKTACQCRD CKCKNTWGSY ECSCSGSLLY IREHDICINR DARGDFSWGV IWIIIMGLGA AALGAYTVYK YRIRTYMDSE
601: IRAIMAQYMP LDNNPNTQLS SQLEL

Arabidopsis Description

VSR2VACUOLAR SORTING RECEPTOR 2 [Source:UniProtKB/TrEMBL;Acc:F4IMR9]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.