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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013445.1-P Field mustard plasma membrane 98.89 98.89
CDY50060 Canola plasma membrane 96.83 97.14
AT4G20110.2 Thale cress plasma membrane 89.22 89.65
PGSC0003DMT400018916 Potato plasma membrane 69.26 69.92
KRH37180 Soybean plasma membrane 68.94 69.71
VIT_01s0011g01050.t01 Wine grape extracellular, plasma membrane, vacuole 69.57 69.68
KRH12166 Soybean plasma membrane 68.94 69.27
Solyc02g081970.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 69.41 68.65
CDY02347 Canola plasma membrane 67.51 67.73
CDY43178 Canola plasma membrane 67.51 67.73
GSMUA_Achr3P23680_001 Banana plasma membrane 57.21 64.12
GSMUA_AchrUn_... Banana plasma membrane 59.11 63.44
Os06t0664300-01 Rice plasma membrane 63.71 63.11
TraesCS7A01G483700.1 Wheat golgi, plasma membrane 61.65 62.04
Zm00001d046945_P001 Maize plasma membrane 61.81 62.0
CDY12449 Canola cytosol 28.37 61.72
TraesCS7D01G471300.1 Wheat golgi 61.33 61.43
CDY37219 Canola extracellular, golgi, plasma membrane 60.7 61.38
TraesCS7B01G387100.1 Wheat extracellular, plasma membrane 61.17 61.27
CDX81459 Canola plasma membrane 60.54 61.22
CDX93144 Canola extracellular, plasma membrane, vacuole 59.11 61.15
CDY64650 Canola plasma membrane 60.7 60.99
Os04t0611400-01 Rice plasma membrane 61.01 60.92
TraesCS7A01G281400.1 Wheat cytosol, nucleus, plastid 9.51 60.61
CDY43647 Canola plasma membrane 60.06 60.35
TraesCS7D01G145700.2 Wheat cytosol 28.68 60.33
KXG27024 Sorghum plasma membrane 58.48 60.29
CDY65441 Canola plasma membrane 60.22 60.22
CDY62643 Canola mitochondrion 9.03 60.0
TraesCS2D01G423700.1 Wheat golgi 60.22 59.28
TraesCS2A01G425800.2 Wheat mitochondrion 60.22 59.28
CDX91478 Canola plasma membrane 58.16 59.19
HORVU7Hr1G109180.2 Barley mitochondrion, plasma membrane, vacuole 61.49 59.15
TraesCS2B01G446100.1 Wheat plasma membrane 60.06 59.03
CDY60753 Canola plasma membrane 57.84 58.87
CDX78128 Canola plasma membrane 58.16 58.72
CDX73599 Canola plasma membrane 58.16 58.72
CDY13344 Canola plasma membrane 58.0 58.56
CDX67539 Canola plasma membrane 57.84 58.4
CDX99194 Canola cytosol 9.19 56.31
CDY70452 Canola cytosol 9.19 56.31
CDY42565 Canola cytosol 9.19 56.31
CDY04821 Canola mitochondrion, plasma membrane 55.31 54.96
CDY38158 Canola cytosol, plasma membrane 25.2 52.65
KXG20551 Sorghum plasma membrane, plastid 61.49 51.53
CDY62642 Canola cytosol, plasma membrane, plastid 10.94 49.29
CDY10980 Canola cytosol 13.47 47.75
CDY38157 Canola mitochondrion 27.73 47.3
TraesCS6A01G310600.1 Wheat cytosol 27.58 45.91
CDY22565 Canola nucleus 7.77 42.98
TraesCS7A01G436000.1 Wheat mitochondrion 14.1 42.18
GSMUA_Achr7P03630_001 Banana plasma membrane 55.94 34.88
HORVU2Hr1G099640.3 Barley extracellular 16.64 16.33
Protein Annotations
EnsemblPlants:CDX78975EnsemblPlantsGene:GSBRNA2T00131486001Gene3D:2.10.25.10Gene3D:3.50.30.30GO:A0A078CQ34InterPro:PA_domain
InterPro:cEGFPANTHER:PTHR22765PANTHER:PTHR22765:SF56PFAM:PF02225PFAM:PF12662ProteinID:CDX78975
ProteinID:CDX78975.1SEG:segSignalP:SignalP-TMSUPFAM:SSF52025TMHMM:TMhelixUniParc:UPI0004EE8CD8
MapMan:22.5.2.1:::::
Description
BnaA01g10420D
Coordinates
chrLK031816:+:1154533..1157850
Molecular Weight (calculated)
70224.4 Da
IEP (calculated)
5.759
GRAVY (calculated)
-0.354
Length
631 amino acids
Sequence
(BLAST)
001: MSSVNGRALT SLLAALTIIA FAMVVVDARF VVEKESIRVL NPEEMRSKHD GSIANFGLPD YGGFLIGAVV YPDSKTDGCS AFGKTFKPKF PRPTILLLDR
101: GGCYFALKAW NAQQAGAAAV LVADNKDEPL LTMDSPEESR DADGFIEKLT IPSVLIDKSF GDSLREGFKK GKNIVLKLDW RESVPHPDQR VEYELWTNSN
201: DECGARCDEQ MDFVKNFKGH AQILEKGGYT AFTPHYITWF CPFQFVNSPQ CKSQCINHGR YCAPDPEKNF REGYEGKDVV FENLRQLCVH RVANESSRSW
301: VWWDYVTDFH ARCSMKEKKY SIECAENVIK SLNLPIEKVK KCMGDPEADT DNEVLKMEQV VQLGRGERGD VTILPTLVIN NAQYRGRLER TAVLKAICAG
401: FNETSDPPIC LNTGLETNEC LENNGGCWQD TRANMTACKD TFRGRICECP VVKGVQYKGD GYTSCTPYGP ARCTINNGGC WSDTRNGATF SACSDSMSTG
501: CKCPPGFKGD GLTCEDINEC KEGLVCQCSG CKCRNTWGGH GCSCSGDRLY ISDQDICIER NGSKTAWWLT LLILAIVAVA GLAGYLFYKY RFRSYMDSEI
601: MTIMSQYMPL ESQRAREVPS EAEPFTHNST A
Best Arabidopsis Sequence Match ( AT4G20110.1 )
(BLAST)
001: MGLVNGRASL TFLLAALTII AMVVEARFVV EKESISVLNP EEMRSKHDGS IANFGLPDYG GFLIGSVVYP DSKTDGCSAF GKTFKPKFPR PTILLLDRGG
101: CYFALKAWHA QQAGAAAVLV ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE SVPHPDKRVE YELWTNSNDE
201: CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW
301: WDYVTDFHSR CSMKEKKYSI DCAESVIKSL NLPIEKIKKC IGDPEADTEN QVLRTEQVSQ IGRGNRGDVT ILPTLVINNA QYRGRLERTA VLKAICAGFN
401: ETSEPAICLN TGLETNECLE NNGGCWQDTK ANITACQDTF RGRLCECPVV KGVQYKGDGY TSCTPYGPAR CTMNNGGCWS DTRNGLTFSA CSDSVSTGCK
501: CPEGFQGDGL TCEDINECKE RSVCQCSGCR CKNSWGGYKC SCSGDRLYIN DQDTCIERYG SKTAWWLTFL ILAIVAVAGL AGYIFYKYRF RSYMDSEIMT
601: IMSQYMPLES QRAREVPSEA EPFTL
Arabidopsis Description
VSR7VACUOLAR SORTING RECEPTOR 7 [Source:UniProtKB/TrEMBL;Acc:F4JUS0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.