Factsheet for TraesCS7A01G483700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34940.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT2G34940.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT2G34940.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G471300.1	Wheat	golgi	97.61	97.14
TraesCS7B01G387100.1	Wheat	extracellular, plasma membrane	97.13	96.67
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	96.33	92.07
TraesCS7A01G281400.1	Wheat	cytosol, nucleus, plastid	13.56	85.86
Zm00001d046945_P001	Maize	plasma membrane	81.5	81.24
Os06t0664300-01	Rice	plasma membrane	82.46	81.16
KXG20551	Sorghum	plasma membrane, plastid	82.14	68.39
GSMUA_AchrUn_...	Banana	plasma membrane	63.8	68.03
KRH37180	Soybean	plasma membrane	65.23	65.54
VIT_01s0011g01050.t01	Wine grape	extracellular, plasma membrane, vacuole	65.71	65.4
TraesCS2A01G425800.2	Wheat	mitochondrion	66.67	65.21
KRH12166	Soybean	plasma membrane	64.91	64.81
PGSC0003DMT400018916	Potato	plasma membrane	63.96	64.16
Solyc02g081970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	64.11	63.01
TraesCS6A01G310600.1	Wheat	cytosol	37.32	61.74
CDY02347	Canola	plasma membrane	61.88	61.69
Bra023151.1-P	Field mustard	plasma membrane	61.88	61.69
CDX78975	Canola	plasma membrane	62.04	61.65
CDY43178	Canola	plasma membrane	61.72	61.53
AT1G30900.1	Thale cress	extracellular, plasma membrane, vacuole	61.72	61.33
Bra013445.1-P	Field mustard	plasma membrane	61.72	61.33
CDY50060	Canola	plasma membrane	61.24	61.05
AT4G20110.2	Thale cress	plasma membrane	60.77	60.67
Bra039877.1-P	Field mustard	cytosol	30.46	57.88
TraesCS4A01G193900.1	Wheat	extracellular	57.58	57.67
CDY12449	Canola	cytosol	26.48	57.24
AT2G34940.1	Thale cress	plasma membrane	56.3	57.12
TraesCS5A01G146800.2	Wheat	golgi	57.58	56.85
TraesCS2A01G105500.1	Wheat	golgi	56.78	55.62
CDY64650	Canola	plasma membrane	55.66	55.57
Bra021940.1-P	Field mustard	plasma membrane	55.5	55.5
TraesCS1A01G134600.2	Wheat	extracellular, plasma membrane, vacuole	56.3	55.33
CDY43647	Canola	plasma membrane	55.18	55.1
TraesCS7A01G436000.1	Wheat	mitochondrion	18.18	54.03
TraesCS4A01G135100.3	Wheat	plasma membrane	56.62	53.3
TraesCS5A01G050400.2	Wheat	extracellular, plasma membrane	37.96	47.22
TraesCS5A01G050500.1	Wheat	extracellular, mitochondrion	37.8	46.02
GSMUA_Achr7P03630_001	Banana	plasma membrane	59.33	36.76
TraesCS4A01G252300.1	Wheat	extracellular, mitochondrion	7.18	31.03

Protein Annotations

EnsemblPlants:TraesCS7A01G483700.1	EnsemblPlantsGene:TraesCS7A01G483700	Gene3D:2.10.25.10	Gene3D:3.50.30.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EGF_Ca-bd_CS	InterPro:PA_domain	PANTHER:PTHR22765	PANTHER:PTHR22765:SF56	PFAM:PF02225
ScanProsite:PS01187	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52025	TMHMM:TMhelix	MapMan:22.5.2.1

Description

No Description!

Coordinates

chr7A:+:675227963..675232107

Molecular Weight (calculated)

69093.7 Da

IEP (calculated)

5.990

GRAVY (calculated)

-0.372

Length

627 amino acids

Sequence
(BLAST)

001: MGGARQFLAA LLAVAAAAAM VAPARGRFVV EKSSVRVLAP EHIRGHHDAA IGNFGVPDYG GTLTGVVLYP DKKATGCAEF PARFKSKSGR PVVLLLDRGE
101: CYFALKSWNA QQAGAAAVLI ADTADEQLLT MDTPEASPDT RYLDKLNIPS ALVNRAFGES LKRMAEKADA EGEVVVKLDW RESMPHPDER VEYELWTNSN
201: DECGPRCDEQ AAFVRSFRGH AQILERGGYA RFTPHYITWY CPEAFRLTRQ CQSQCINHGR YCAPDPEEDF GEGYEGKQVV VENLRQLCVH RVANESGRPW
301: AWWDFAMDYK LRCSMKEKKY SKACAEEVVA SLGLPLEKVL ACMGDPDADA DNAVLSKEQE DQIGRGSRGD VTILPTLVIN DVQYRGKLER TAVLKAVCAG
401: FKEGTEPQVC LSHGMETNEC LHRNGGCWRD EATNVTACRD TYRGRVCECP VVNGVRYDGD GYTHCKAVGP GRCALNHGGC WAETKGERTF SACSDTALSG
501: CRCPPGFQGD GHKCEDLDEC KDKLACTCPD CHCNNTWGSY ECGCRGNQVY IRGEDVCVAN SMSRFGWLVA LLAVSCAAGL GVAGFIFYKY RLRSYMDSEI
601: MAIMSQYMPL DSQNNEHQPL RQHAPDA

Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)

001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A

Arabidopsis Description

VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.