Factsheet for Bra039877.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039875.1-P	Field mustard	cytosol	15.45	49.51
CDY12449	Canola	cytosol	42.73	48.62
AT1G30900.1	Thale cress	extracellular, plasma membrane, vacuole	84.55	44.22
Bra023151.1-P	Field mustard	plasma membrane	83.33	43.72
Bra021940.1-P	Field mustard	plasma membrane	72.12	37.96
TraesCS7A01G281400.1	Wheat	cytosol, nucleus, plastid	11.21	37.37
GSMUA_Achr3P23680_001	Banana	plasma membrane	58.18	34.1
TraesCS7D01G145700.2	Wheat	cytosol	30.61	33.67
Bra013445.1-P	Field mustard	plasma membrane	63.94	33.44
Zm00001d046945_P001	Maize	plasma membrane	59.39	31.16
Os06t0664300-01	Rice	plasma membrane	60.0	31.08
TraesCS7B01G387100.1	Wheat	extracellular, plasma membrane	59.09	30.95
TraesCS7D01G471300.1	Wheat	golgi	58.79	30.79
GSMUA_AchrUn_...	Banana	plasma membrane	54.85	30.78
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	58.18	30.77
Bra005096.1-P	Field mustard	plasma membrane	57.58	30.65
TraesCS7A01G483700.1	Wheat	golgi, plasma membrane	57.88	30.46
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	58.18	30.43
KXG27024	Sorghum	plasma membrane	56.36	30.39
Bra028535.1-P	Field mustard	plasma membrane	56.97	30.08
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	58.79	29.57
Bra006952.1-P	Field mustard	plasma membrane	56.67	29.26
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	48.79	29.17
Os04t0611400-01	Rice	plasma membrane	55.15	28.8
TraesCS2A01G425800.2	Wheat	mitochondrion	54.85	28.24
TraesCS2B01G446100.1	Wheat	plasma membrane	54.55	28.04
TraesCS7A01G436000.1	Wheat	mitochondrion	17.88	27.96
TraesCS2D01G423700.1	Wheat	golgi	54.24	27.93
KXG20551	Sorghum	plasma membrane, plastid	59.39	26.03
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	13.64	25.28
TraesCS6A01G310600.1	Wheat	cytosol	26.36	22.96
Bra039898.1-P	Field mustard	cytosol	22.12	19.06
GSMUA_Achr7P03630_001	Banana	plasma membrane	55.15	17.98
HORVU2Hr1G099640.3	Barley	extracellular	22.42	11.51

Protein Annotations

EnsemblPlants:Bra039877.1	EnsemblPlants:Bra039877.1-P	EnsemblPlantsGene:Bra039877	Gene3D:2.10.25.10	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:EGF_Ca-bd_CS	PANTHER:PTHR22765	PANTHER:PTHR22765:SF56	ScanProsite:PS01187
UniParc:UPI0002545820	UniProt:M4FFK3	MapMan:22.5.2.1	:	:	:

Description

AT2G14720 (E=2e-061) VSR-2 | VSR-2; calcium ion binding

Coordinates

chrA08:-:6111693..6113598

Molecular Weight (calculated)

36822.8 Da

IEP (calculated)

4.891

GRAVY (calculated)

-0.323

Length

330 amino acids

Sequence
(BLAST)

001: MDSPEESKEA DDLIEKLNIP SALIDLSFAN TLKQALKKGE EVVLKIDWSE SLPHPDERVE YELWTNTNDE WVCDAIDEQM NFVKNFKGHA QILEKGGYSL
101: FTPHYITWFC PKEYVSAISV LVGIPPWDYV TDFHIRCSMK ENKYSKECAE IVVESLGKLE RNAVLKAICS GFKERTEPGI CLSGDIETNE CLEANGGCWQ
201: DKKSNVTACK DTFRGIVCKF PVVNGVREMA ILHVNLSLLD LNVINSPYGP ARCSINQGGC WSETRKGETF LACLNSETSG CRCPPGFKGD GLKCEDIDEC
301: KEKSACQCDG CKCKNKWGSF KCKCSAIVSI

Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)

001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A

Arabidopsis Description

VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.