Factsheet for Bra039898.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38157	Canola	mitochondrion	87.99	91.08
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	73.63	51.09
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	69.97	41.81
PGSC0003DMT400077180	Potato	cytosol	56.4	35.76
PGSC0003DMT400080213	Potato	plasma membrane	57.7	35.42
Solyc10g074980.1.1	Tomato	extracellular	57.44	35.26
Solyc09g015670.2.1	Tomato	plastid	56.14	34.62
Bra028535.1-P	Field mustard	plasma membrane	55.87	34.24
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	55.09	34.09
KRH48733	Soybean	extracellular, golgi, plasma membrane	55.35	34.08
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	55.09	33.81
KRH40723	Soybean	extracellular, golgi, plasma membrane	54.57	33.49
Bra006952.1-P	Field mustard	plasma membrane	55.87	33.49
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	53.52	32.85
Bra005096.1-P	Field mustard	plasma membrane	53.0	32.74
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.48	31.85
Bra013445.1-P	Field mustard	plasma membrane	43.6	26.47
Bra023151.1-P	Field mustard	plasma membrane	43.08	26.23
Bra021940.1-P	Field mustard	plasma membrane	39.16	23.92
Bra039877.1-P	Field mustard	cytosol	19.06	22.12
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	3.39	7.3
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	1.04	6.9
Zm00001d053767_P001	Maize	mitochondrion	2.09	5.71
Bra039875.1-P	Field mustard	cytosol	0.52	1.94

Protein Annotations

EnsemblPlants:Bra039898.1	EnsemblPlants:Bra039898.1-P	EnsemblPlantsGene:Bra039898	Gene3D:3.50.30.30	InterPro:PA_domain	PANTHER:PTHR22765
PANTHER:PTHR22765:SF54	PFAM:PF02225	SUPFAM:SSF52025	UniParc:UPI0002541196	UniProt:M4FFM4	MapMan:22.5.2.1

Description

AT2G30290 (E=2e-157) | vacuolar sorting receptor, putative

Coordinates

chrA07:-:1777546..1779980

Molecular Weight (calculated)

42874.3 Da

IEP (calculated)

7.946

GRAVY (calculated)

-0.231

Length

383 amino acids

Sequence
(BLAST)

001: MDPLVAAVEI SRRRSPATVT SGDEEDSGGS RFACLGFPVI QIKPDGVGKH GSGMMMMKNV RLFVMGWVMW WGSCMGMFVV EKNSLRVTSA EFIRGIYECA
101: LGNFGVPQYG GSMSGSVVYP KANQKACKNF EDFDISFISR VAGLPTFVLV DRGDCYFTLK AWNAQRAGAA TILVADNRPE PLITMDAPED ETADAEYLLN
201: ITIPSALLSR SLGSTIKTAI DQGALPHPND RVAYELWTNS NDECGSKCDA QIRFLKRFKG AAQILEKGAQ TLLGGYTRFT PHYITWYCPE AFLASRQCKS
301: QCINGGRYCA PDPEQDFSRG YNGRDVIIQN LRQACFFRVM NESGKPWIWW DYVTDFAIRC PITHETRKVQ QTMRRSSYSL PWY

Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)

001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA

Arabidopsis Description

VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.