Factsheet for Bra039817.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001878.1-P
Bra001880.1-P
Bra002306.1-P
Bra012712.1-P
Bra012733.1-P
Bra020106.1-P
Bra033545.1-P
Bra038474.1-P
Bra038475.1-P
Bra038477.1-P
Bra038478.1-P
Bra038479.1-P
Bra040651.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G14720.1	Bra012733.1-P	AT4G16190.1	23738689
AT2G14720.1	Bra033545.1-P	AT4G16190.1	23738689
AT2G14720.1	Bra001878.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra001880.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra012712.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra038474.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra038475.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra038477.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra038478.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra038479.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra040651.1-P	AT4G16500.1	23738689
AT2G14720.1	Bra002306.1-P	AT5G20500.1	23738689
AT2G14720.1	Bra020106.1-P	AT5G20500.1	23738689

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37219	Canola	extracellular, golgi, plasma membrane	99.2	99.2
AT2G14740.1	Thale cress	extracellular, plasma membrane, vacuole	94.71	94.11
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	95.03	93.98
AT2G14720.1	Thale cress	extracellular, plasma membrane, vacuole	93.91	93.31
KRH27575	Soybean	endoplasmic reticulum	81.89	81.37
KRG91109	Soybean	endoplasmic reticulum	82.21	81.3
KRH35666	Soybean	endoplasmic reticulum	81.89	80.98
PGSC0003DMT400066159	Potato	endoplasmic reticulum, plasma membrane, vacuole	80.93	80.16
Solyc01g107130.2.1	Tomato	nucleus	80.77	80.0
KRH77935	Soybean	endoplasmic reticulum	82.05	79.63
VIT_03s0091g00740.t01	Wine grape	plasma membrane	80.13	79.24
Zm00001d012390_P001	Maize	cytosol	11.38	78.89
Zm00001d004678_P001	Maize	cytosol, nucleus, plastid	12.18	75.25
GSMUA_Achr6P16900_001	Banana	cytosol, nucleus, plasma membrane	67.79	74.47
GSMUA_Achr10P...	Banana	cytosol	66.83	73.42
Os10t0346600-00	Rice	plasma membrane	73.72	72.9
Zm00001d014302_P003	Maize	plasma membrane	71.31	72.01
TraesCS1D01G131100.1	Wheat	golgi	72.12	71.09
TraesCS1B01G148200.1	Wheat	plasma membrane	71.79	70.89
TraesCS1A01G134600.2	Wheat	extracellular, plasma membrane, vacuole	72.12	70.53
Bra028535.1-P	Field mustard	plasma membrane	70.03	69.92
Bra005096.1-P	Field mustard	plasma membrane	67.95	68.39
Zm00001d014303_P002	Maize	plasma membrane	67.31	67.85
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	59.94	67.75
Bra006952.1-P	Field mustard	plasma membrane	69.23	67.61
HORVU1Hr1G032780.9	Barley	extracellular	68.11	66.82
Bra023151.1-P	Field mustard	plasma membrane	60.58	60.1
Bra013445.1-P	Field mustard	plasma membrane	60.74	60.06
Bra039877.1-P	Field mustard	cytosol	30.77	58.18
Bra021940.1-P	Field mustard	plasma membrane	55.77	55.5
Bra039875.1-P	Field mustard	cytosol	8.97	54.37
Bra039898.1-P	Field mustard	cytosol	32.85	53.52
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	14.9	52.25

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.50.30.30	EnsemblPlantsGene:Bra039817	EnsemblPlants:Bra039817.1	EnsemblPlants:Bra039817.1-P
InterPro:EGF-like_CS	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:M4FFE4	InterPro:PA_domain	PFAM:PF02225
PFAM:PF12662	ScanProsite:PS01186	ScanProsite:PS01187	PANTHER:PTHR22765	PANTHER:PTHR22765:SF54	SMART:SM00179
SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253EAAE	InterPro:cEGF	SEG:seg

Description

AT2G14740 (E=0.0) ATVSR3 | ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding

Coordinates

chrScaffold000178:+:9077..12060

Molecular Weight (calculated)

69451.3 Da

IEP (calculated)

5.361

GRAVY (calculated)

-0.423

Length

624 amino acids

Sequence
(BLAST)

001: MKHQFLCFLL LLSIPFLCES RFVVEKNSLS VTSPDSIKGA HDCAIGNFGI PQYGGSMAGT VVYPKENQKS CKEFSDFSIS FKSQPGALPT FLLVDRGDCF
101: FALKVWNAQK TGASAVLVAD NVDEPLITMD TPEEDAASAK YIENITIPSA LVTKGFGEKL KKAISGGDMV NLNLDWREAV PHPDARVEYE LWTNSNDECG
201: VKCDMLMEFV KDFKGAAQIL EKGGYTQFRP HYITWYCPHA FTLSRQCKSQ CINKGRYCAP DPEQDFSSGY DGKDVVVENL RQLCVFKVAN ETGKPWVWWD
301: YVTDFQIRCP MKEKKYNKEC ADSVIKSLGI DSRKLDKCMG DPNADSDNPV LKEEQDAQVG KGSRGDVTIL PTLVVNTRQY RGKLEKGAVL KALCSGFEET
401: TEPAICLSTE VESNECLDNN GGCWQDKSAN ITACKDTFRG RVCECPRVDG VQFKGDGYSH CEPSGPGRCT INNGGCWHEE RDRHAFSACV DKDSVKCECP
501: PGFKGDGFKK CEDINECKEK KACQCPECSC KNTWGSYECS CSGDLLYMRD HDTCISKTGS QVRSAWAAVW LIMLSLGLAA GGAYLVYKYR LRQYMDSEIR
601: AIMAQYMPLD SQPEVPNHVN DERA

Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)

001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA

Arabidopsis Description

VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.