Factsheet for HORVU1Hr1G032780.9

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G066680.1
HORVU3Hr1G028600.1
HORVU4Hr1G082210.1
HORVU5Hr1G082810.1
HORVU7Hr1G009480.1
HORVU7Hr1G069280.1
HORVU7Hr1G074340.1
HORVU7Hr1G110720.1
HORVU7Hr1G110810.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G14720.1	HORVU2Hr1G066680.1	AT4G16190.1	23738689
AT2G14720.1	HORVU4Hr1G082210.1	AT4G16190.1	23738689
AT2G14720.1	HORVU5Hr1G082810.1	AT4G16190.1	23738689
AT2G14720.1	HORVU7Hr1G069280.1	AT4G16190.1	23738689
AT2G14720.1	HORVU7Hr1G074340.1	AT4G16190.1	23738689
AT2G14720.1	HORVU3Hr1G028600.1	AT5G20500.1	23738689
AT2G14720.1	HORVU7Hr1G009480.1	AT5G20500.1	23738689
AT2G14720.1	HORVU7Hr1G110720.1	AT5G20500.1	23738689
AT2G14720.1	HORVU7Hr1G110810.1	AT5G20500.1	23738689

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G131100.1	Wheat	golgi	90.57	91.0
TraesCS1B01G148200.1	Wheat	plasma membrane	89.62	90.19
TraesCS1A01G134600.2	Wheat	extracellular, plasma membrane, vacuole	90.41	90.13
Zm00001d014302_P003	Maize	plasma membrane	82.55	84.95
Os10t0346600-00	Rice	plasma membrane	83.49	84.15
Zm00001d014303_P002	Maize	plasma membrane	79.25	81.42
GSMUA_Achr6P16900_001	Banana	cytosol, nucleus, plasma membrane	68.24	76.41
GSMUA_Achr10P...	Banana	cytosol	67.3	75.35
KRH35666	Soybean	endoplasmic reticulum	69.65	70.21
KRG91109	Soybean	endoplasmic reticulum	69.5	70.05
AT2G14740.1	Thale cress	extracellular, plasma membrane, vacuole	67.61	68.47
CDX81459	Canola	plasma membrane	67.14	68.43
CDY37219	Canola	extracellular, golgi, plasma membrane	67.14	68.43
CDX93144	Canola	extracellular, plasma membrane, vacuole	65.57	68.36
KRH27575	Soybean	endoplasmic reticulum	67.45	68.31
AT2G14720.1	Thale cress	extracellular, plasma membrane, vacuole	67.3	68.15
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	66.82	68.11
VIT_03s0091g00740.t01	Wine grape	plasma membrane	67.3	67.83
Solyc01g107130.2.1	Tomato	nucleus	67.14	67.78
PGSC0003DMT400066159	Potato	endoplasmic reticulum, plasma membrane, vacuole	67.14	67.78
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	66.82	67.35
CDY65441	Canola	plasma membrane	66.67	67.19
KRH77935	Soybean	endoplasmic reticulum	66.67	65.94
HORVU5Hr1G046490.2	Barley	cytosol	57.08	64.48
HORVU4Hr1G022950.10	Barley	extracellular	62.42	63.52
HORVU4Hr1G050280.9	Barley	plastid	58.02	56.25
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	52.99	51.37
HORVU2Hr1G017770.3	Barley	plastid	59.28	45.26
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	2.36	25.86
HORVU2Hr1G099640.3	Barley	extracellular	15.57	15.4

Protein Annotations

EnsemblPlants:HORVU1Hr1G032780.9	EnsemblPlantsGene:HORVU1Hr1G032780	Gene3D:2.10.25.10	Gene3D:3.50.30.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:EGF_Ca-bd_CS	InterPro:PA_domain
PANTHER:PTHR22765	PANTHER:PTHR22765:SF54	PFAM:PF02225	ScanProsite:PS01187	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52025	TMHMM:TMhelix	UniParc:UPI000B46C482	UniProt:A0A287F3A7	MapMan:22.5.2.1	:

Description

No Description!

Coordinates

chrchr1H:-:202396472..202436107

Molecular Weight (calculated)

69129.6 Da

IEP (calculated)

6.980

GRAVY (calculated)

-0.310

Length

636 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XLLLLLLAFA AAVKLEARFV VEKNSLMVTS PTALRGRHDS AIGNFGIPQY GGSMAGAVVY PMGNSDACKA FDGGRKEHLF RTKPGALPSF
101: LLIDRGNCLF AKKVWNAQDA GASAVLVVDD KDEPLITMDL LQEDDEAAKY IQNISIPSAL IDKKFGEQLK KAVKDGEMVN VNLDWREAVP HPDNRVEYEL
201: WTNSNDECGP KCDMLMHFLK EFKGAAQLLE KGGYSQFTPH YITWYCPQAF VVSKQCKSQC INHGRYCAPD PEQDFSTGYD GKDVVVENLR QLCVFNVANV
301: IKKPWIWWDY VTDFHIRCPM KDKKYNKKCA ETVIKSLGLE VKKIDKCMGD PNDDSDHPLL KMEQDSQIGK GSRGDVTILP TLVVNNRQYR GQLGRKAVLK
401: AICAGFEETT EPNVCLSDDM ETNECLSDNG GCWQDKAANV TACRDTFRGR VCECPTFNGV QFKGDGYNNC EKTAGPGKCL INHGGCWHET RNRKTFSACQ
501: ESGERNCKCP AGFRGDGVKK CHDIDECKER KACQCPECSC RDTWGGYDCT CSGDLLYIKE HDTCISKTAV KAKEAWAAVC GILVALVIVA AGGYVVYKYR
601: LRKYIGNSSS ILVANPSFAL FALGAIAGAL EFEIPS

Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)

001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA

Arabidopsis Description

VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.