Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G145500.1 | Wheat | plasma membrane | 95.38 | 86.61 |
| TraesCS5B01G145700.1 | Wheat | golgi | 96.09 | 86.01 |
| TraesCS5A01G146800.2 | Wheat | golgi | 95.2 | 84.41 |
| Os11t0116550-01 | Rice | extracellular, plasma membrane, vacuole | 89.17 | 80.19 |
| EES09132 | Sorghum | plasma membrane | 88.63 | 79.59 |
| Zm00001d052354_P005 | Maize | plasma membrane | 87.74 | 79.29 |
| Zm00001d005062_P003 | Maize | plasma membrane | 87.39 | 78.85 |
| HORVU4Hr1G022950.10 | Barley | extracellular | 87.21 | 78.56 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 81.35 | 73.75 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 80.64 | 72.99 |
| Os12t0116000-01 | Rice | plastid | 88.99 | 68.82 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 64.12 | 68.24 |
| HORVU4Hr1G050280.9 | Barley | plastid | 67.85 | 58.23 |
| HORVU1Hr1G032780.9 | Barley | extracellular | 64.48 | 57.08 |
| HORVU5Hr1G046470.1 | Barley | cytosol, mitochondrion | 5.86 | 56.9 |
| HORVU7Hr1G109180.2 | Barley | mitochondrion, plasma membrane, vacuole | 59.15 | 50.76 |
| HORVU2Hr1G017770.3 | Barley | plastid | 74.42 | 50.3 |
| HORVU2Hr1G099640.3 | Barley | extracellular | 18.65 | 16.33 |
Protein Annotations
| Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | UniProt:A0A287R254 | InterPro:EGF-like_Ca-bd_dom |
| InterPro:EGF_Ca-bd_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:HORVU5Hr1G046490 | EnsemblPlants:HORVU5Hr1G046490.2 | InterPro:PA_domain | PFAM:PF02225 | ScanProsite:PS01187 |
| PANTHER:PTHR22765 | PANTHER:PTHR22765:SF57 | SMART:SM00179 | SUPFAM:SSF52025 | TMHMM:TMhelix | UniParc:UPI000B488BAD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:361462697..361466947
Molecular Weight (calculated)
61207.3 Da
IEP (calculated)
6.197
GRAVY (calculated)
-0.493
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVVAYPKA NRKACKSFDD FDISYKAKPG SLPTFLLVDR GDCFFTKKAW NAQNAGVAAI LVADDKDEPL ITMDTPEESG RADYLENITI ASALITKSFG
101: DRLRKAVDSG HMVNVNLDWR ESLPHPDERV EYEFWTNSND ECGPKCDSQI DFVKSFKGPA QILEKKGYTQ FTPHYITWYC PEAFTLSKQC KSQCINHGRY
201: CAPDPEQDFS KGYDGKDVVV QNLRQVCVYK VAKENKKPWL WWDYVTDFAI RCPMKEKKYT KECADGVIKS LGLDHKAIDK CIGDPNADEE NPVLKAEQDA
301: QIGKGARGDV TILPTLVINN RQYRGKLDKG AVLKALCAGF QETTEPAVCL SEDIQTNECL ENNGGCWHDK ATNISACKDT FRGRVCECPV VKGVKFVGDG
401: YTHCEASGSG RCEINNGGCW KETRNGRTHS ACTDGGCKCP DGFKGDGVHK CIDVDECKER TACQCKDCKC KNTWGSYECG CGGGLLYMKE HDTCISKDAG
501: ARVGWNFLWV VLFGLAAAGX XXXXXXXXXX XSYMDSEIRA IMAQYMPLDN QGEIPSHSHH IEM
101: DRLRKAVDSG HMVNVNLDWR ESLPHPDERV EYEFWTNSND ECGPKCDSQI DFVKSFKGPA QILEKKGYTQ FTPHYITWYC PEAFTLSKQC KSQCINHGRY
201: CAPDPEQDFS KGYDGKDVVV QNLRQVCVYK VAKENKKPWL WWDYVTDFAI RCPMKEKKYT KECADGVIKS LGLDHKAIDK CIGDPNADEE NPVLKAEQDA
301: QIGKGARGDV TILPTLVINN RQYRGKLDKG AVLKALCAGF QETTEPAVCL SEDIQTNECL ENNGGCWHDK ATNISACKDT FRGRVCECPV VKGVKFVGDG
401: YTHCEASGSG RCEINNGGCW KETRNGRTHS ACTDGGCKCP DGFKGDGVHK CIDVDECKER TACQCKDCKC KNTWGSYECG CGGGLLYMKE HDTCISKDAG
501: ARVGWNFLWV VLFGLAAAGX XXXXXXXXXX XSYMDSEIRA IMAQYMPLDN QGEIPSHSHH IEM
001: MKQLLCYLPW LLLLSLVVSP FNEARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
Arabidopsis Description
VSR4Vacuolar-sorting receptor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZQ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.