Factsheet for Zm00001d052354_P005

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09132	Sorghum	plasma membrane	96.79	96.17
Zm00001d005062_P003	Maize	plasma membrane	95.35	95.19
Os11t0116550-01	Rice	extracellular, plasma membrane, vacuole	90.21	89.78
HORVU5Hr1G046490.2	Barley	cytosol	79.29	87.74
TraesCS5D01G145500.1	Wheat	plasma membrane	87.32	87.74
TraesCS5B01G145700.1	Wheat	golgi	87.96	87.12
TraesCS4D01G119400.1	Wheat	golgi	87.32	87.04
TraesCS4A01G193900.1	Wheat	extracellular	87.32	86.9
TraesCS4B01G121300.2	Wheat	extracellular	87.16	86.88
HORVU4Hr1G022950.10	Barley	extracellular	86.68	86.4
TraesCS5A01G146800.2	Wheat	golgi	87.48	85.83
GSMUA_Achr11P...	Banana	extracellular, golgi, plasma membrane	81.38	81.64
GSMUA_Achr7P22040_001	Banana	extracellular, plasma membrane	81.06	81.19
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	65.97	77.69
Os12t0116000-01	Rice	plastid	90.21	77.2
Zm00001d012390_P001	Maize	cytosol	10.91	75.56
Zm00001d005060_P001	Maize	extracellular	13.0	74.31
Zm00001d004678_P001	Maize	cytosol, nucleus, plastid	11.88	73.27
Zm00001d029056_P002	Maize	extracellular, plasma membrane, vacuole	73.03	72.68
Zm00001d022439_P001	Maize	extracellular, plasma membrane, vacuole	70.79	69.67
Zm00001d047522_P002	Maize	extracellular, plasma membrane, vacuole	72.87	69.42
Zm00001d014302_P003	Maize	plasma membrane	65.49	66.02
Zm00001d014303_P002	Maize	plasma membrane	62.44	62.84
Zm00001d046945_P001	Maize	plasma membrane	59.39	58.82
Zm00001d053767_P001	Maize	mitochondrion	11.72	52.14

Protein Annotations

EntrezGene:100383531	Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	ProteinID:AQK57036.1
InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	UniProt:K7U6F0	InterPro:PA_domain	PFAM:PF02225	ScanProsite:PS01187
PANTHER:PTHR22765	PANTHER:PTHR22765:SF47	SMART:SM00179	SUPFAM:SSF52025	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000221A9D9	EnsemblPlantsGene:Zm00001d052354	EnsemblPlants:Zm00001d052354_P005	EnsemblPlants:Zm00001d052354_T005	SEG:seg	:

Description

Vacuolar-sorting receptor 1

Coordinates

chr4:-:187992043..187996222

Molecular Weight (calculated)

69075.8 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.440

Length

623 amino acids

Sequence
(BLAST)

001: MGSRSAGAAL RLWLLALLLG CCQGRFVVEK NSLKVTAPDG LKGTYECAIG NFGVPQYGGT MVGFVAYPKA NRKACKSFDD FDISYKAKPG AFPTFLLVDR
101: GDCYFAKKAW NAQKAGAAAI LVADDKDEPL ITMDNPEEGG NTDYLENITI PSALITKSFG DRLKKAIDSG DMVNVNLDWR EALPHPDERV EYEFWTNSND
201: ECGPKCDSQI DFVKSFKGAA QVLEKKGYTE FTPHYITWYC PEAFILSKQC KSQCINHGRY CAPDPEQDFS KGYDGKDVVV QNLRQVCVFK VAKEHKKPWL
301: WWDYVTDFAI RCPMKEKKYT KECADGVIKS LGLDHKAIDK CIGDPDADEE NHVLKAEQDA QIGKGSRGDV TILPTLVINN RQYRGKLDKG AVLKALCAGF
401: RETTEPAVCL SDDIQTNECL ENNGGCWQDK AANITACKDT FRGRVCECPV VKGVKFVGDG YTHCEASGSG RCEINNGGCW KDTKNGRTYS ACTDDGCRCP
501: DGFKGDGKHK CEDVDECKER TVCQCEECRC KNTWGSYECG CSGGLLYMKE HDTCISKNGA SEAGWGFLWV VVFGLVAAGI AGYAVYKYRI RRYMDSEIRA
601: IMAQYMPLDS QGDVQSHAHH IEM

Best Arabidopsis Sequence Match ( AT3G52850.1 )
(BLAST)

001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI

Arabidopsis Description

VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.