Factsheet for Zm00001d005062_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052354_P005	Maize	plasma membrane	95.19	95.35
Os11t0116550-01	Rice	extracellular, plasma membrane, vacuole	91.03	90.73
TraesCS5D01G145500.1	Wheat	plasma membrane	87.02	87.58
TraesCS4D01G119400.1	Wheat	golgi	87.66	87.52
HORVU5Hr1G046490.2	Barley	cytosol	78.85	87.39
TraesCS4A01G193900.1	Wheat	extracellular	87.5	87.22
HORVU4Hr1G022950.10	Barley	extracellular	87.34	87.2
TraesCS5B01G145700.1	Wheat	golgi	87.82	87.12
TraesCS4B01G121300.2	Wheat	extracellular	86.7	86.56
TraesCS5A01G146800.2	Wheat	golgi	86.86	85.35
GSMUA_Achr11P...	Banana	extracellular, golgi, plasma membrane	81.57	81.96
GSMUA_Achr7P22040_001	Banana	extracellular, plasma membrane	81.57	81.83
Os12t0116000-01	Rice	plastid	91.03	78.02
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	66.03	77.88
Zm00001d012390_P001	Maize	cytosol	11.06	76.67
Zm00001d005060_P001	Maize	extracellular	13.3	76.15
Zm00001d029056_P002	Maize	extracellular, plasma membrane, vacuole	74.36	74.12
Zm00001d004678_P001	Maize	cytosol, nucleus, plastid	11.86	73.27
Zm00001d047522_P002	Maize	extracellular, plasma membrane, vacuole	74.04	70.64
Zm00001d022439_P001	Maize	extracellular, plasma membrane, vacuole	70.67	69.67
Zm00001d014302_P003	Maize	plasma membrane	65.38	66.02
Zm00001d014303_P002	Maize	plasma membrane	62.18	62.68
Zm00001d046945_P001	Maize	plasma membrane	58.97	58.51
Zm00001d053767_P001	Maize	mitochondrion	11.86	52.86

Protein Annotations

EntrezGene:103647159	Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	UniProt:A0A1D6EJ13
InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	ProteinID:ONM20085.1	InterPro:PA_domain	PFAM:PF02225	ScanProsite:PS01187
PFscan:PS51257	PANTHER:PTHR22765	PANTHER:PTHR22765:SF47	SMART:SM00179	SUPFAM:SSF52025	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004DE8465	EnsemblPlantsGene:Zm00001d005062	EnsemblPlants:Zm00001d005062_P003	EnsemblPlants:Zm00001d005062_T003	SEG:seg

Description

Vacuolar-sorting receptor 1

Coordinates

chr2:-:156883275..156887322

Molecular Weight (calculated)

69261.1 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.424

Length

624 amino acids

Sequence
(BLAST)

001: MGSRFASAAL RLLVCAALLL GCCHGRFVVE KNSLKVTAPD DLKGTYECAI GNFGVPQYGG TMVGFVAYPK ANRKACKSFD DFDISYKAKP GAFPTFLLVD
101: RGDCYFAKKA WNAQKAGAAA ILVADDKDEP LITMDNPEES GNTDYLENIT IPSALITKSF GDKLKKVIDN GDMVSVNLDW REALPHPDER VEYEFWTNSN
201: DECGLKCDSQ IDFVKSFKGA AQVLEKKGYT EFTPHYITWY CPEAFILSKQ CKSQCINHGR YCAPDPEQDF SKGYDGKDVV VQNLRQVCVF KVAKEHKKPW
301: LWWDYVTDFA IRCPMKEKKY TKECADGVIK SLGLDHKAID KCIGDPDADE ENPVLKAEQD AQIGKGSRGD VTILPTLVIN NRQYRGKLDK GAVLKALCAG
401: FKETTEPAVC LSEDIQTNEC LENNGGCWQD KAANITACKD TFRGRVCECP IVKGVKFVGD GYSHCEASGS GRCEINNGGC WKDTKNGRTY SACNDDGCKC
501: PDGFKGDGRH KCEDIDECKE RTVCQCKECK CKNTWGSYEC GCSGGLLYMK EHDTCISKSG ASEAGWGFLW VIFFGLVAAG VAGYAVYKYR IRRYMDSEIR
601: AIMAQYMPLD NQGDVQSHSH HIEM

Best Arabidopsis Sequence Match ( AT3G52850.1 )
(BLAST)

001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI

Arabidopsis Description

VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.