Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005062_P003 | Maize | plasma membrane | 76.15 | 13.3 |
| Zm00001d052354_P005 | Maize | plasma membrane | 74.31 | 13.0 |
| Zm00001d029056_P002 | Maize | extracellular, plasma membrane, vacuole | 54.13 | 9.42 |
| Zm00001d047522_P002 | Maize | extracellular, plasma membrane, vacuole | 55.05 | 9.17 |
| Zm00001d022439_P001 | Maize | extracellular, plasma membrane, vacuole | 52.29 | 9.0 |
| Zm00001d014302_P003 | Maize | plasma membrane | 44.95 | 7.93 |
| Zm00001d014303_P002 | Maize | plasma membrane | 44.04 | 7.75 |
| Zm00001d046945_P001 | Maize | plasma membrane | 33.03 | 5.72 |
| Zm00001d053767_P001 | Maize | mitochondrion | 7.34 | 5.71 |
| Zm00001d012390_P001 | Maize | cytosol | 0.92 | 1.11 |
| Zm00001d004678_P001 | Maize | cytosol, nucleus, plastid | 0.92 | 0.99 |
| CDY22565 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d005060_P001 | EnsemblPlants:Zm00001d005060_T001 | EnsemblPlantsGene:Zm00001d005060 | Gene3D:3.50.30.30 | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF54 |
| PFscan:PS51257 | ProteinID:ONM20081.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0008428689 | UniProt:A0A1D6EJ08 |
| MapMan:35.1 | : | : | : | : | : |
Description
Vacuolar-sorting receptor 1
Coordinates
chr2:+:156702497..156705565
Molecular Weight (calculated)
11980.5 Da
IEP (calculated)
7.823
GRAVY (calculated)
0.117
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRFASAVL QLLVCATLLL GCCHGRFVVD KNNLKVTAPD DLKGTYECAI GNFEVPQYGD TMVGFVAYPK ANRKACKSFE DFDINYKAKP GAFPTFLLVD
101: RGETSYLIL
101: RGETSYLIL
001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
Arabidopsis Description
VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.