Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94904 | Sorghum | extracellular, plasma membrane, vacuole | 96.01 | 95.55 |
| Zm00001d047522_P002 | Maize | extracellular, plasma membrane, vacuole | 95.85 | 91.74 |
| Os03t0335300-01 | Rice | plasma membrane | 86.26 | 85.99 |
| TraesCS4B01G170000.1 | Wheat | plasma membrane | 84.5 | 84.78 |
| TraesCS4D01G172100.1 | Wheat | golgi | 84.5 | 84.78 |
| TraesCS4A01G135100.3 | Wheat | plasma membrane | 84.34 | 79.28 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 74.92 | 75.4 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 73.8 | 74.4 |
| Zm00001d005062_P003 | Maize | plasma membrane | 74.12 | 74.36 |
| Zm00001d022439_P001 | Maize | extracellular, plasma membrane, vacuole | 74.6 | 73.78 |
| Zm00001d052354_P005 | Maize | plasma membrane | 72.68 | 73.03 |
| HORVU4Hr1G050280.9 | Barley | plastid | 75.4 | 71.95 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 60.06 | 71.08 |
| Zm00001d012390_P001 | Maize | cytosol | 10.06 | 70.0 |
| Zm00001d004678_P001 | Maize | cytosol, nucleus, plastid | 10.86 | 67.33 |
| Zm00001d014302_P003 | Maize | plasma membrane | 61.5 | 62.3 |
| Zm00001d014303_P002 | Maize | plasma membrane | 58.47 | 59.13 |
| Zm00001d046945_P001 | Maize | plasma membrane | 56.87 | 56.6 |
| Zm00001d005060_P001 | Maize | extracellular | 9.42 | 54.13 |
| Zm00001d053767_P001 | Maize | mitochondrion | 10.06 | 45.0 |
Protein Annotations
| Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | UniProt:A0A1D6K254 | InterPro:EGF-like_Ca-bd_dom |
| InterPro:EGF_Ca-bd_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ProteinID:ONL97771.1 | ProteinID:ONL97773.1 | InterPro:PA_domain | PFAM:PF02225 | ScanProsite:PS01187 |
| PANTHER:PTHR22765 | PANTHER:PTHR22765:SF47 | SMART:SM00179 | SUPFAM:SSF52025 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0001CAC07F | EnsemblPlantsGene:Zm00001d029056 | EnsemblPlants:Zm00001d029056_P002 | EnsemblPlants:Zm00001d029056_T002 | SEG:seg | : |
Description
Vacuolar-sorting receptor 1
Coordinates
chr1:+:56681471..56700079
Molecular Weight (calculated)
69845.7 Da
IEP (calculated)
5.184
GRAVY (calculated)
-0.393
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRGHTWLAL LVVVVLALAD AAAGRFVVEK NSIQVTSPDE LKGKYECAIG NFGVPQYGGT LHGLVEYPKS NRKACQSFDI SFKPKQAGGR PTFVLVDRGE
101: CFFTTKAWNA QNAGAAAVLV VDDKSEPLIT MDNPEEGKEH LENITIPSVL ITKKLGESLK KSAENGDMLS VLLDWRESLP HPDERVEYEF WTNSNDECGP
201: KCDMQMDFVK SFRGTAQILE KKGYTQFTPH YITWYCPEAF VDSKQCKSQC INHGRYCAPD PEQDFSQGYD GRNVVVQNLH QICVFKIANE TGKPWLWWDY
301: VHDFALRCPM KDKKYNHDCA SDVIKSLGLD IEKINKCVGD PEANEENVIL KAEQDAQIGH GKRGDVTILP TLVINNRQYR GKLDKVAVLK AICSGFEETT
401: EPAVCLSEEV QTNECLENNG GCWLDKANNV TACKDTFRGR VCECPIVRGV KFVGDGYIHC EASGIGRCEI NNGGCWQESK DGKTISACSN EVSEGCKCPV
501: GFKGDGEKSC EDIDECKEKL YCQCKGCSCK NTWGSYECSC GDDNMLYMRE HDTCISKEGT ATTVGWSFLW VIFFGLVFAG VGAYAVYKYR LRSYMDSEIR
601: AIMAQYMPLD NQEGANQHQV VHANDI
101: CFFTTKAWNA QNAGAAAVLV VDDKSEPLIT MDNPEEGKEH LENITIPSVL ITKKLGESLK KSAENGDMLS VLLDWRESLP HPDERVEYEF WTNSNDECGP
201: KCDMQMDFVK SFRGTAQILE KKGYTQFTPH YITWYCPEAF VDSKQCKSQC INHGRYCAPD PEQDFSQGYD GRNVVVQNLH QICVFKIANE TGKPWLWWDY
301: VHDFALRCPM KDKKYNHDCA SDVIKSLGLD IEKINKCVGD PEANEENVIL KAEQDAQIGH GKRGDVTILP TLVINNRQYR GKLDKVAVLK AICSGFEETT
401: EPAVCLSEEV QTNECLENNG GCWLDKANNV TACKDTFRGR VCECPIVRGV KFVGDGYIHC EASGIGRCEI NNGGCWQESK DGKTISACSN EVSEGCKCPV
501: GFKGDGEKSC EDIDECKEKL YCQCKGCSCK NTWGSYECSC GDDNMLYMRE HDTCISKEGT ATTVGWSFLW VIFFGLVFAG VGAYAVYKYR LRSYMDSEIR
601: AIMAQYMPLD NQEGANQHQV VHANDI
001: MKQLLCYLPW LLLLSLVVSP FNEARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
Arabidopsis Description
VSR4Vacuolar-sorting receptor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZQ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.