Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99915 | Sorghum | plasma membrane | 92.1 | 91.67 |
| Os07t0680000-01 | Rice | plasma membrane | 81.52 | 82.43 |
| TraesCS2D01G105100.1 | Wheat | plasma membrane | 79.94 | 79.56 |
| TraesCS2B01G122400.1 | Wheat | golgi | 80.09 | 79.34 |
| TraesCS2A01G105500.1 | Wheat | golgi | 80.09 | 79.22 |
| Zm00001d012390_P001 | Maize | cytosol | 10.74 | 75.56 |
| Zm00001d029056_P002 | Maize | extracellular, plasma membrane, vacuole | 73.78 | 74.6 |
| Zm00001d047522_P002 | Maize | extracellular, plasma membrane, vacuole | 73.78 | 71.41 |
| Zm00001d004678_P001 | Maize | cytosol, nucleus, plastid | 11.37 | 71.29 |
| Zm00001d052354_P005 | Maize | plasma membrane | 69.67 | 70.79 |
| Zm00001d005062_P003 | Maize | plasma membrane | 69.67 | 70.67 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 69.04 | 70.37 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 68.4 | 69.61 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 56.56 | 67.67 |
| Zm00001d014302_P003 | Maize | plasma membrane | 62.09 | 63.59 |
| HORVU2Hr1G017770.3 | Barley | plastid | 80.41 | 61.1 |
| Zm00001d046945_P001 | Maize | plasma membrane | 60.03 | 60.41 |
| Zm00001d014303_P002 | Maize | plasma membrane | 58.93 | 60.26 |
| Zm00001d005060_P001 | Maize | extracellular | 9.0 | 52.29 |
| Zm00001d053767_P001 | Maize | mitochondrion | 9.16 | 41.43 |
Protein Annotations
| EntrezGene:100383090 | Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.50.30.30 | EMBL:BT066163 | EMBL:BT067733 |
| UniProt:C0PCZ4 | InterPro:EGF-like_Ca-bd_dom | InterPro:EGF_Ca-bd_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ProteinID:ONM60620.1 | InterPro:PA_domain | PFAM:PF02225 |
| ScanProsite:PS01187 | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF57 | SMART:SM00179 | SUPFAM:SSF52025 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000194AFFB | EnsemblPlantsGene:Zm00001d022439 | EnsemblPlants:Zm00001d022439_P001 | EnsemblPlants:Zm00001d022439_T001 | SEG:seg |
Description
Vacuolar-sorting receptor 1
Coordinates
chr7:+:177710234..177713974
Molecular Weight (calculated)
70052.1 Da
IEP (calculated)
6.199
GRAVY (calculated)
-0.330
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTAARRLL LPLLLVALIA AHRAAARFVV EKNSLRVTSP AVLRGVYECA IGNFGMPQYG GTMHGVVVYP KADAKACRPF ADSGLSFKPR SGGLPVFLLV
101: DRGDCYFTTK GWNAQNAGAA AVLVADDRVE PLITMDSPES SGTEHIENIT IPSALVTKRF GEDLRKALQS GDMVNVLLDW RESLPHPDER VEYELWTNSN
201: DECGAKCDMQ MSFVRSFRGI AQALEKRGYT QFTPHYITWY CPEAFVLSKQ CRSQCINHGR YCAPDPEQDF STGYDGRDVV LQNLVQICVF RVANGTRRPW
301: MWWDYVHDFA VRCPMKEKKY TRECANGVIN SLGLDIEKIN KCVGDPEADK ENPVLKAEQD AQIGHGSRGD VTILPTLVVN NRQYRGKLEK TSVLKAVCSG
401: FEETTEPDVC LREDIETNEC LENNGGCWLD KATNVSACKD TFRGRVCECP IVNGVKFIGD GYNHCEASGL GRCQINNGGC WNETRNGKSV SACSNQEAKG
501: CKCPAGFKGD GANSCEDVDE CKEKLFCQCK DCACENTWGS YECSCGGGNS LYIREHDTCI SKHSSSTPSW GFLWVVFLGL ALAGAGAYAV YKYRLRSYMD
601: SEIRAIMAQY MPLESQDMPS QQHHLVPVDR ADV
101: DRGDCYFTTK GWNAQNAGAA AVLVADDRVE PLITMDSPES SGTEHIENIT IPSALVTKRF GEDLRKALQS GDMVNVLLDW RESLPHPDER VEYELWTNSN
201: DECGAKCDMQ MSFVRSFRGI AQALEKRGYT QFTPHYITWY CPEAFVLSKQ CRSQCINHGR YCAPDPEQDF STGYDGRDVV LQNLVQICVF RVANGTRRPW
301: MWWDYVHDFA VRCPMKEKKY TRECANGVIN SLGLDIEKIN KCVGDPEADK ENPVLKAEQD AQIGHGSRGD VTILPTLVVN NRQYRGKLEK TSVLKAVCSG
401: FEETTEPDVC LREDIETNEC LENNGGCWLD KATNVSACKD TFRGRVCECP IVNGVKFIGD GYNHCEASGL GRCQINNGGC WNETRNGKSV SACSNQEAKG
501: CKCPAGFKGD GANSCEDVDE CKEKLFCQCK DCACENTWGS YECSCGGGNS LYIREHDTCI SKHSSSTPSW GFLWVVFLGL ALAGAGAYAV YKYRLRSYMD
601: SEIRAIMAQY MPLESQDMPS QQHHLVPVDR ADV
001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
Arabidopsis Description
VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.