Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G105100.1 | Wheat | plasma membrane | 73.35 | 96.07 |
| TraesCS2B01G122400.1 | Wheat | golgi | 73.47 | 95.77 |
| TraesCS2A01G105500.1 | Wheat | golgi | 73.35 | 95.47 |
| Os07t0680000-01 | Rice | plasma membrane | 63.27 | 84.19 |
| EER99915 | Sorghum | plasma membrane | 62.18 | 81.45 |
| Zm00001d022439_P001 | Maize | extracellular, plasma membrane, vacuole | 61.1 | 80.41 |
| HORVU5Hr1G046490.2 | Barley | cytosol | 50.3 | 74.42 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 54.62 | 73.27 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 54.62 | 73.15 |
| HORVU4Hr1G022950.10 | Barley | extracellular | 54.38 | 72.48 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 45.62 | 71.83 |
| HORVU4Hr1G050280.9 | Barley | plastid | 54.38 | 69.05 |
| HORVU1Hr1G032780.9 | Barley | extracellular | 45.26 | 59.28 |
| HORVU7Hr1G109180.2 | Barley | mitochondrion, plasma membrane, vacuole | 43.46 | 55.18 |
| HORVU5Hr1G046470.1 | Barley | cytosol, mitochondrion | 3.84 | 55.17 |
| HORVU2Hr1G099640.3 | Barley | extracellular | 12.12 | 15.71 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G017770.3 | EnsemblPlantsGene:HORVU2Hr1G017770 | Gene3D:2.10.25.10 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EGF_Ca-bd_CS |
| InterPro:PA_domain | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF57 | PFAM:PF02225 | ScanProsite:PS01187 | SEG:seg |
| SUPFAM:SSF52025 | TMHMM:TMhelix | UniParc:UPI000B48328B | UniProt:A0A287H7Y1 | MapMan:22.5.2.1 | : |
Description
No Description!
Coordinates
chrchr2H:-:44844014..44851292
Molecular Weight (calculated)
92389.5 Da
IEP (calculated)
7.655
GRAVY (calculated)
-0.415
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: GFDRRWPSTH AHTIASSTHK GASPTRATRA RMHGTPSVFP SPRMSMSMSM TASQKGRRFP RHHARPRPRP QTQTHEKQKA GALEAFQRTY PPHHTIDIEE
101: AATYLALLLP LLHLSLSHST ASPSQPPVKS ILTSFAPKPR SIAFSAHTPP SSLPFPEIDP YSVAFLHRPI LASDPRTCTG LARERDRGIG TVKRAGVMGG
201: RWSPSAGWGP WRPRLLLLLV ALTAATVEGR FVVEKNSLRV TSPASLRGVY ECAIGNFGMP QYGGTMHGVV VYPKANARAC NPFADFGLSF NPKAGGLPVF
301: LLVDRGDCYF TTKGWNAQTA GAAAVLVADD RAEPLITMDT PESSGKEHLE NITVPSALVS KRFGDDLKSA LENGDMVNVL LDWRESLPHP DERVEYEFWT
401: NSNDECGAKC DMQMNFVRDF RGVAQVLEQR GYTQFAPHYI TWYCPEAFVL SAQCRSQCIN HGRYCAPDPE QDFTTGYDGK DVVVQNLIQI CLFKVANESR
501: KPWLWWDYVH DFAIRCPMKE KKYTTECARG VIKSLGMDTD KITKCVGDPD ADEDNPVLKA EQDAQIGHGA RGDVTILPTF VVNNRQYRGK LDKRAVLRAI
601: CSGFEETTEP DICLTQDIQT NQCLENNGGC WLDKNTNFTA CKDTFRGRVC ECPVVNGVKF VGDGYTHCEA SGVGRCQINN GGCWKETRNG KSVSACSNEQ
701: TKGCKCPQGF KGDGVHGCED VDECKERLFC QCKDCSCENT WGSYECGCGG SNMLYMREHD TCISKVATSS VGWGFLWVIF FGLGFAGVGA YAVYKYRLRS
801: YMDSEIRAIM AQYMPLENQE TSSHQRHVEH ADI
101: AATYLALLLP LLHLSLSHST ASPSQPPVKS ILTSFAPKPR SIAFSAHTPP SSLPFPEIDP YSVAFLHRPI LASDPRTCTG LARERDRGIG TVKRAGVMGG
201: RWSPSAGWGP WRPRLLLLLV ALTAATVEGR FVVEKNSLRV TSPASLRGVY ECAIGNFGMP QYGGTMHGVV VYPKANARAC NPFADFGLSF NPKAGGLPVF
301: LLVDRGDCYF TTKGWNAQTA GAAAVLVADD RAEPLITMDT PESSGKEHLE NITVPSALVS KRFGDDLKSA LENGDMVNVL LDWRESLPHP DERVEYEFWT
401: NSNDECGAKC DMQMNFVRDF RGVAQVLEQR GYTQFAPHYI TWYCPEAFVL SAQCRSQCIN HGRYCAPDPE QDFTTGYDGK DVVVQNLIQI CLFKVANESR
501: KPWLWWDYVH DFAIRCPMKE KKYTTECARG VIKSLGMDTD KITKCVGDPD ADEDNPVLKA EQDAQIGHGA RGDVTILPTF VVNNRQYRGK LDKRAVLRAI
601: CSGFEETTEP DICLTQDIQT NQCLENNGGC WLDKNTNFTA CKDTFRGRVC ECPVVNGVKF VGDGYTHCEA SGVGRCQINN GGCWKETRNG KSVSACSNEQ
701: TKGCKCPQGF KGDGVHGCED VDECKERLFC QCKDCSCENT WGSYECGCGG SNMLYMREHD TCISKVATSS VGWGFLWVIF FGLGFAGVGA YAVYKYRLRS
801: YMDSEIRAIM AQYMPLENQE TSSHQRHVEH ADI
001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
Arabidopsis Description
VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.