Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G145700.1 | Wheat | golgi | 99.19 | 97.77 |
| TraesCS5A01G146800.2 | Wheat | golgi | 98.55 | 96.22 |
| HORVU5Hr1G046490.2 | Barley | cytosol | 86.61 | 95.38 |
| Os11t0116550-01 | Rice | extracellular, plasma membrane, vacuole | 89.19 | 88.34 |
| TraesCS4D01G119400.1 | Wheat | golgi | 88.55 | 87.84 |
| EES09132 | Sorghum | plasma membrane | 88.55 | 87.56 |
| Zm00001d052354_P005 | Maize | plasma membrane | 87.74 | 87.32 |
| Zm00001d005062_P003 | Maize | plasma membrane | 87.58 | 87.02 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 81.45 | 81.32 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 80.48 | 80.23 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 65.0 | 76.18 |
| Os12t0116000-01 | Rice | plastid | 89.03 | 75.82 |
| TraesCS4D01G172100.1 | Wheat | golgi | 74.19 | 73.72 |
| TraesCS2D01G105100.1 | Wheat | plasma membrane | 73.23 | 71.38 |
| TraesCS1D01G131100.1 | Wheat | golgi | 67.9 | 66.51 |
| TraesCS5D01G061200.2 | Wheat | extracellular | 50.81 | 60.93 |
| TraesCS7D01G145700.2 | Wheat | cytosol | 27.9 | 57.67 |
| TraesCS7D01G471300.1 | Wheat | golgi | 58.55 | 57.62 |
| TraesCS2D01G423700.1 | Wheat | golgi | 57.58 | 55.69 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G145500.1 | EnsemblPlantsGene:TraesCS5D01G145500 | Gene3D:2.10.25.10 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:EGF-like_Ca-bd_dom | InterPro:EGF_Ca-bd_CS | InterPro:PA_domain | PANTHER:PTHR22765 |
| PANTHER:PTHR22765:SF47 | PFAM:PF02225 | ScanProsite:PS01187 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00179 |
| SUPFAM:SSF52025 | TIGR:cd00054 | TIGR:cd02125 | TMHMM:TMhelix | MapMan:22.5.2.1 | : |
Description
No Description!
Coordinates
chr5D:-:232138265..232141963
Molecular Weight (calculated)
68919.8 Da
IEP (calculated)
6.485
GRAVY (calculated)
-0.422
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRLLLVLAV LLCGFCCCCE GRFVVEKNSL KVTAPDSLKG SYECAIGNFG VPQYGGTMVG VVAYPKSNRK ACKSFDDFDI SYKAKPGSLP TFLLVDRGDC
101: FFTKKAWNAQ NAGVAAILVA DDKDEPLITM DTPEESGRAD YLENITIPSA LITKSFGDRL RKAVDGGHMV NVNLDWRESL PHPDERVEYE FWTNSNDECG
201: PKCDSQIDFI KSFKGPAQIL EKKGYTQFTP HYITWYCPEA FTLSKQCKSQ CINHGRYCAP DPEQDFSKGY DGKDVVVQNL RQVCVYKVAK ENKKPWLWWD
301: YVTDFAIRCP MKEKKYTKEC ADGVIKSLGL DHKAIDKCIG DPNADEENHV LKAEQDAQIG KGARGDVTIL PTLVINNRQY RGKLDKGAVL KALCAGFQET
401: TEPAVCLSED IQTNECLENN GGCWHDKAAN ISACKDTFRG RVCECPVVKG VKFVGDGYTH CEASGSGRCE INNGGCWKET RNGRTHSACT DGGCKCPDGF
501: KGDGVHKCED VDECKERTAC QCKECKCNNT WGSYECGCGG GFLYMKEHDT CISKDAGARV GWNFLWFLLF GLAAVGIAGY AVYKYRIRSY MDSEIRAIMA
601: QYMPLDNQGE IPNHSHHIEM
101: FFTKKAWNAQ NAGVAAILVA DDKDEPLITM DTPEESGRAD YLENITIPSA LITKSFGDRL RKAVDGGHMV NVNLDWRESL PHPDERVEYE FWTNSNDECG
201: PKCDSQIDFI KSFKGPAQIL EKKGYTQFTP HYITWYCPEA FTLSKQCKSQ CINHGRYCAP DPEQDFSKGY DGKDVVVQNL RQVCVYKVAK ENKKPWLWWD
301: YVTDFAIRCP MKEKKYTKEC ADGVIKSLGL DHKAIDKCIG DPNADEENHV LKAEQDAQIG KGARGDVTIL PTLVINNRQY RGKLDKGAVL KALCAGFQET
401: TEPAVCLSED IQTNECLENN GGCWHDKAAN ISACKDTFRG RVCECPVVKG VKFVGDGYTH CEASGSGRCE INNGGCWKET RNGRTHSACT DGGCKCPDGF
501: KGDGVHKCED VDECKERTAC QCKECKCNNT WGSYECGCGG GFLYMKEHDT CISKDAGARV GWNFLWFLLF GLAAVGIAGY AVYKYRIRSY MDSEIRAIMA
601: QYMPLDNQGE IPNHSHHIEM
001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
Arabidopsis Description
VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.