Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
23128297
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G121300.2 | Wheat | extracellular | 97.12 | 97.12 |
| TraesCS4A01G193900.1 | Wheat | extracellular | 97.12 | 96.96 |
| HORVU4Hr1G022950.10 | Barley | extracellular | 96.16 | 96.16 |
| TraesCS5D01G145500.1 | Wheat | plasma membrane | 87.84 | 88.55 |
| Os11t0116550-01 | Rice | extracellular, plasma membrane, vacuole | 88.32 | 88.18 |
| EES09132 | Sorghum | plasma membrane | 88.0 | 87.72 |
| Zm00001d005062_P003 | Maize | plasma membrane | 87.52 | 87.66 |
| Zm00001d052354_P005 | Maize | plasma membrane | 87.04 | 87.32 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 80.0 | 80.52 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 79.2 | 79.58 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 64.64 | 76.37 |
| Os12t0116000-01 | Rice | plastid | 88.16 | 75.69 |
| TraesCS4D01G172100.1 | Wheat | golgi | 73.12 | 73.24 |
| TraesCS2D01G105100.1 | Wheat | plasma membrane | 73.12 | 71.86 |
| TraesCS1D01G131100.1 | Wheat | golgi | 66.88 | 66.03 |
| TraesCS5D01G061200.2 | Wheat | extracellular | 50.08 | 60.54 |
| TraesCS7D01G471300.1 | Wheat | golgi | 58.88 | 58.41 |
| TraesCS7D01G145700.2 | Wheat | cytosol | 28.0 | 58.33 |
| TraesCS2D01G423700.1 | Wheat | golgi | 57.28 | 55.85 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G119400.1 | EnsemblPlantsGene:TraesCS4D01G119400 | Gene3D:2.10.25.10 | Gene3D:3.50.30.30 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EGF-like_Ca-bd_dom | InterPro:EGF_Ca-bd_CS | InterPro:PA_domain | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF57 |
| PFAM:PF02225 | ScanProsite:PS01187 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00179 | SUPFAM:SSF52025 |
| TIGR:cd00054 | TIGR:cd02125 | TMHMM:TMhelix | MapMan:22.5.2.1 | : | : |
Description
No Description!
Coordinates
chr4D:-:100571621..100575457
Molecular Weight (calculated)
69292.2 Da
IEP (calculated)
5.477
GRAVY (calculated)
-0.378
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPPPLLL TLVWAAALLW CGGCDARFVV EKNSLRVTAP EALKGAYECA IGNFGVPQYG GTMVGVVAYP KANRKACKGF DDFDVSFKAR PGALPTFLLV
101: DRGDCYFTKK AWNAQNAGAA AILVADDRDE PLITMDTPEE SGRVEYLENI TIPSALISKS FGDRLKKTID NGEMVNVNLD WRESLPHPDE RVEYEFWTNS
201: NDECGPKCDS QIDFVKSFKG AAQILEKKGY TQFTPHYITW YCPEAYTLSK QCKSQCINHG RYCAPDPEQD FSKGYDGKDV VVQNLRQVCV YKVAKESKKP
301: WLWWDYVTDF AVRCPMKEMK YTKECADAVI TSLGLDHKAI DKCIGDPDAD EENPVLKAEQ DAQIGKGSRG DVTILPTLVI NNRQYRGKLD KGAVLKALCA
401: GFRETTEPAV CLSEDIQTNE CLENNGGCWQ DKAANITACK DTFRGKVCEC PVVKGVKFVG DGYTHCEASG AGRCEINNGG CWKETMNGRT YSACTADGCK
501: CPDGFKGDGI HKCEDIDECK ERTACQCKEC NCKNTWGSYE CGCSGGLLYM KEHDTCISKS AAAQVGWNFL WVVFFGLAAV GIAAYAVYKY RIRRYMDSEI
601: RAIMAQYMPL ENQGEIPSNS HHIEM
101: DRGDCYFTKK AWNAQNAGAA AILVADDRDE PLITMDTPEE SGRVEYLENI TIPSALISKS FGDRLKKTID NGEMVNVNLD WRESLPHPDE RVEYEFWTNS
201: NDECGPKCDS QIDFVKSFKG AAQILEKKGY TQFTPHYITW YCPEAYTLSK QCKSQCINHG RYCAPDPEQD FSKGYDGKDV VVQNLRQVCV YKVAKESKKP
301: WLWWDYVTDF AVRCPMKEMK YTKECADAVI TSLGLDHKAI DKCIGDPDAD EENPVLKAEQ DAQIGKGSRG DVTILPTLVI NNRQYRGKLD KGAVLKALCA
401: GFRETTEPAV CLSEDIQTNE CLENNGGCWQ DKAANITACK DTFRGKVCEC PVVKGVKFVG DGYTHCEASG AGRCEINNGG CWKETMNGRT YSACTADGCK
501: CPDGFKGDGI HKCEDIDECK ERTACQCKEC NCKNTWGSYE CGCSGGLLYM KEHDTCISKS AAAQVGWNFL WVVFFGLAAV GIAAYAVYKY RIRRYMDSEI
601: RAIMAQYMPL ENQGEIPSNS HHIEM
001: MKQLLCYLPW LLLLSLVVSP FNEARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKDCAESVIK SLGIDSRKID KCMGDPDADL DNPVLKEEQD AQVGKGTRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEESTEPAIC LSTDMETNEC LDNNGGCWQD KSANITACKD TFRGKVCVCP IVDGVRFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GVKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YMRDHDTCIS KTGSQVKSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEVP NHTNDERA
Arabidopsis Description
VSR4Vacuolar-sorting receptor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZQ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.