Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052354_P005 | Maize | plasma membrane | 96.17 | 96.79 |
| Os11t0116550-01 | Rice | extracellular, plasma membrane, vacuole | 90.91 | 91.05 |
| HORVU5Hr1G046490.2 | Barley | cytosol | 79.59 | 88.63 |
| TraesCS5D01G145500.1 | Wheat | plasma membrane | 87.56 | 88.55 |
| TraesCS5B01G145700.1 | Wheat | golgi | 88.68 | 88.39 |
| TraesCS4D01G119400.1 | Wheat | golgi | 87.72 | 88.0 |
| TraesCS4A01G193900.1 | Wheat | extracellular | 87.72 | 87.86 |
| HORVU4Hr1G022950.10 | Barley | extracellular | 86.92 | 87.2 |
| TraesCS4B01G121300.2 | Wheat | extracellular | 86.92 | 87.2 |
| TraesCS5A01G146800.2 | Wheat | golgi | 87.72 | 86.61 |
| GSMUA_Achr11P... | Banana | extracellular, golgi, plasma membrane | 82.14 | 82.93 |
| GSMUA_Achr7P22040_001 | Banana | extracellular, plasma membrane | 81.82 | 82.48 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 66.19 | 78.45 |
| Os12t0116000-01 | Rice | plastid | 90.91 | 78.3 |
| EER94904 | Sorghum | extracellular, plasma membrane, vacuole | 74.16 | 73.93 |
| EER99915 | Sorghum | plasma membrane | 71.77 | 70.75 |
| KXG27024 | Sorghum | plasma membrane | 55.82 | 57.19 |
| KXG20551 | Sorghum | plasma membrane, plastid | 59.97 | 49.93 |
Protein Annotations
| Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.40.30.10 | Gene3D:3.50.30.30 | EntrezGene:8067617 | UniProt:C5Y3H0 |
| EnsemblPlants:EES09132 | ProteinID:EES09132 | ProteinID:EES09132.1 | InterPro:EGF-like_Ca-bd_dom | InterPro:EGF_Ca-bd_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PA_domain |
| PFAM:PF02225 | ScanProsite:PS01187 | PFscan:PS51257 | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF47 | SMART:SM00179 |
| EnsemblPlantsGene:SORBI_3005G013300 | SUPFAM:SSF52025 | unigene:Sbi.4318 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A869AA |
| RefSeq:XP_002450144.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:1190324..1194712
Molecular Weight (calculated)
69557.5 Da
IEP (calculated)
6.423
GRAVY (calculated)
-0.445
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRSAASAA LRIWLLVSVA LLLGCCQGRF VVEKNSLKVT APDDLKGTYE CAIGNFGVPQ YGGTMVGFVA YPKANRKACK SFDDFDISYK AKPGAFPTFL
101: LVDRGDCYFA KKAWNAQKAG AAAILVADDK DEPLITMDNP EESGNTDYLE NITIPSALIT KSFGDRLKKA IDKGDMVNVN LDWREALPHP DERVEYEFWT
201: NSNDECGPKC DSQIDFVKSF KGAAQVLEKK GYTEFTPHYI TWYCPEAFIL SKQCKSQCIN HGRYCAPDPE QDFSKGYDGK DVVVQNLRQV CVFKVAKEHK
301: KPWLWWDYVT DFAIRCPMKE KKYTKECAEG VIKSLGLDHK AIDKCIGDPD ADEENPVLKA EQDAQIGKGS RGDVTILPTL VINNRQYRGK LDKGAVLKAL
401: CAGFKETTEP AVCLSEDIQT NECLENNGGC WQDKAANITA CKDTFRGRVC ECPVVKGVKF VGDGYTHCEA SGSGRCEINN GGCWKDTKNG RTYSACTDDG
501: CKCPDGFKGD GKHKCEDIDE CKEKTACQCK ECKCKNTWGS YECGCSGGLL YMREHDTCIS KNGGSEAGWG FLWVVFFGLV AAGIAGYAVY KYRIRRYMDS
601: EIRAIMAQYM PLDNQGDVQS HSHHIEM
101: LVDRGDCYFA KKAWNAQKAG AAAILVADDK DEPLITMDNP EESGNTDYLE NITIPSALIT KSFGDRLKKA IDKGDMVNVN LDWREALPHP DERVEYEFWT
201: NSNDECGPKC DSQIDFVKSF KGAAQVLEKK GYTEFTPHYI TWYCPEAFIL SKQCKSQCIN HGRYCAPDPE QDFSKGYDGK DVVVQNLRQV CVFKVAKEHK
301: KPWLWWDYVT DFAIRCPMKE KKYTKECAEG VIKSLGLDHK AIDKCIGDPD ADEENPVLKA EQDAQIGKGS RGDVTILPTL VINNRQYRGK LDKGAVLKAL
401: CAGFKETTEP AVCLSEDIQT NECLENNGGC WQDKAANITA CKDTFRGRVC ECPVVKGVKF VGDGYTHCEA SGSGRCEINN GGCWKDTKNG RTYSACTDDG
501: CKCPDGFKGD GKHKCEDIDE CKEKTACQCK ECKCKNTWGS YECGCSGGLL YMREHDTCIS KNGGSEAGWG FLWVVFFGLV AAGIAGYAVY KYRIRRYMDS
601: EIRAIMAQYM PLDNQGDVQS HSHHIEM
001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI
Arabidopsis Description
VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.