Factsheet for Os10t0346600-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0469600-01
Os04t0311400-01
Os06t0659500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G14720.1	Os02t0469600-01	AT4G16190.1	23738689
AT2G14720.1	Os04t0311400-01	AT4G16190.1	23738689
AT2G14720.1	Os06t0659500-01	AT5G20500.1	23738689

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014302_P003	Maize	plasma membrane	87.32	89.16
TraesCS1D01G131100.1	Wheat	golgi	88.27	87.99
TraesCS1A01G134600.2	Wheat	extracellular, plasma membrane, vacuole	88.27	87.3
TraesCS1B01G148200.1	Wheat	plasma membrane	87.32	87.18
Zm00001d014303_P002	Maize	plasma membrane	82.73	84.33
HORVU1Hr1G032780.9	Barley	extracellular	84.15	83.49
GSMUA_Achr6P16900_001	Banana	cytosol, nucleus, plasma membrane	74.96	83.27
GSMUA_Achr10P...	Banana	cytosol	73.85	82.04
KRG91109	Soybean	endoplasmic reticulum	75.28	75.28
KRH35666	Soybean	endoplasmic reticulum	74.96	74.96
CDX93144	Canola	extracellular, plasma membrane, vacuole	72.27	74.75
CDY37219	Canola	extracellular, golgi, plasma membrane	73.53	74.36
VIT_03s0091g00740.t01	Wine grape	plasma membrane	74.33	74.33
AT2G14740.1	Thale cress	extracellular, plasma membrane, vacuole	73.69	74.04
AT2G14720.1	Thale cress	extracellular, plasma membrane, vacuole	73.69	74.04
CDX81459	Canola	plasma membrane	73.22	74.04
KRH27575	Soybean	endoplasmic reticulum	73.38	73.73
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	72.9	73.72
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	73.38	73.38
PGSC0003DMT400066159	Potato	endoplasmic reticulum, plasma membrane, vacuole	73.22	73.33
CDY65441	Canola	plasma membrane	73.22	73.22
Solyc01g107130.2.1	Tomato	nucleus	72.9	73.02
KRH77935	Soybean	endoplasmic reticulum	71.63	70.3
Os11t0116550-01	Rice	extracellular, plasma membrane, vacuole	67.67	68.21
Os03t0335300-01	Rice	plasma membrane	65.13	65.45
Os07t0680000-01	Rice	plasma membrane	64.66	65.18
Os06t0664300-01	Rice	plasma membrane	59.27	58.71
Os12t0116000-01	Rice	plastid	67.51	58.52
Os04t0611400-01	Rice	plasma membrane	56.74	56.65

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	EntrezGene:4348376	ProteinID:AAK92655.1
ProteinID:ABB47273.1	ProteinID:BAF26314.1	ProteinID:BAT10441.1	ProteinID:EAZ15760.1	InterPro:EGF_Ca-bd_CS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os10g0346600
EnsemblPlants:Os10t0346600-00	InterPro:PA_domain	PFAM:PF02225	PFAM:PF12662	ScanProsite:PS01187	PANTHER:PTHR22765
PANTHER:PTHR22765:SF54	UniProt:Q339K4	SUPFAM:SSF52025	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000009D66B
RefSeq:XP_015614532.1	InterPro:cEGF	SEG:seg	:	:	:

Description

Similar to Vacuolar sorting receptor 4 precursor (AtVSR4) (Epidermal growth factor receptor-like protein 2b) (AtELP2b) (BP80-like protein a) (AtBP80a). (Os10t0346600-00)

Coordinates

chr10:-:10411380..10418438

Molecular Weight (calculated)

70031.2 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.431

Length

631 amino acids

Sequence
(BLAST)

001: MRGPAGLPLP LVVAVALAAA AVMVVEARFV VEKNSLMVTS PTSLRGRHDS AIGNFGVPQY GGSMAGTVVY PKDNADACEA YDGDRHFRAK PGALPNFLLI
101: DRGNCLFAKK VWNAQNAGAS AVLVVDDKDE PLITMDLPRE DDEAAKYIQN ITIPSALIDK KFGEQLKKAI KDGEMVNVNL DWREAVPHPD DRVEYELWTN
201: SNDECGPKCD MLMNFLKEFK GAAQLLEKGG YSQFTPHYIT WYCPQAFVVS KQCKSQCINH GRYCAPDPEQ DFSTGYEGKD VVVENLRQLC VFQVAKESKK
301: PWIWWDYVTD FHIRCPMKDK KYNKKCAETV IKSLGLDVKK VDKCMGDPNA DSDHPLLKME QDAQIGKGSR GDVTILPTLV VNNRQYRGKL ERKAVLKAIC
401: AGFEETTEPN VCLSDEMETN ECLNDNGGCW QDKAANVTAC RDTFRGRVCE CPTFNGVQFK GDGYSNCEPA GPGKCLINHG GCWHETRNGK TFSACQESGN
501: GKCQCPAGFR GDGVKKCEDI NECKEKKACQ CPECSCRDTW GDYECTCSGD LLYIKEHDTC ISKTAVQGKA AWAAVWGILI VLVVVAAGSY VVYKYRLRSY
601: MDSEIRAIMA QYMPLDSQGE VPNHTNDEEH H

Best Arabidopsis Sequence Match ( AT2G14740.1 )
(BLAST)

001: MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR
101: GDCFFALKVW NAQKAGASAV LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW REAVPHPDDR VEYELWTNSN
201: DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW
301: VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG
401: FEETTEPAIC LSTDVESNEC LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC WHEERDGHAF SACVDKDSVK
501: CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD
601: SEIRAIMAQY MPLDSQPEIP NHVNDERA

Arabidopsis Description

VSR3VSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178VT51]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.