Factsheet for Bra013445.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78975	Canola	plasma membrane	98.89	98.89
AT4G20110.2	Thale cress	plasma membrane	88.91	89.33
PGSC0003DMT400018916	Potato	plasma membrane	69.26	69.92
KRH37180	Soybean	plasma membrane	68.94	69.71
VIT_01s0011g01050.t01	Wine grape	extracellular, plasma membrane, vacuole	69.26	69.37
KRH12166	Soybean	plasma membrane	68.94	69.27
Solyc02g081970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	69.41	68.65
Bra023151.1-P	Field mustard	plasma membrane	67.67	67.89
GSMUA_Achr3P23680_001	Banana	plasma membrane	57.21	64.12
Bra039877.1-P	Field mustard	cytosol	33.44	63.94
GSMUA_AchrUn_...	Banana	plasma membrane	59.11	63.44
Os06t0664300-01	Rice	plasma membrane	63.55	62.95
TraesCS7A01G483700.1	Wheat	golgi, plasma membrane	61.33	61.72
Zm00001d046945_P001	Maize	plasma membrane	61.49	61.69
Bra021940.1-P	Field mustard	plasma membrane	60.86	61.24
TraesCS7D01G471300.1	Wheat	golgi	61.01	61.11
TraesCS7B01G387100.1	Wheat	extracellular, plasma membrane	60.86	60.95
Os04t0611400-01	Rice	plasma membrane	60.86	60.76
Bra039817.1-P	Field mustard	extracellular, golgi, plasma membrane	60.06	60.74
TraesCS7A01G281400.1	Wheat	cytosol, nucleus, plastid	9.51	60.61
Bra013121.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.22	60.22
KXG27024	Sorghum	plasma membrane	58.32	60.13
TraesCS7D01G145700.2	Wheat	cytosol	28.37	59.67
TraesCS2D01G423700.1	Wheat	golgi	60.38	59.44
TraesCS2A01G425800.2	Wheat	mitochondrion	60.38	59.44
TraesCS2B01G446100.1	Wheat	plasma membrane	60.22	59.19
Bra005096.1-P	Field mustard	plasma membrane	57.84	58.87
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	61.17	58.84
Bra028535.1-P	Field mustard	plasma membrane	58.0	58.56
Bra006952.1-P	Field mustard	plasma membrane	58.48	57.75
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	49.45	56.52
Bra039875.1-P	Field mustard	cytosol	9.19	56.31
KXG20551	Sorghum	plasma membrane, plastid	61.17	51.26
TraesCS6A01G310600.1	Wheat	cytosol	27.58	45.91
Bra039898.1-P	Field mustard	cytosol	26.47	43.6
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	12.04	42.7
TraesCS7A01G436000.1	Wheat	mitochondrion	13.95	41.71
GSMUA_Achr7P03630_001	Banana	plasma membrane	56.1	34.98
HORVU2Hr1G099640.3	Barley	extracellular	16.48	16.17

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.50.30.30	EnsemblPlantsGene:Bra013445	EnsemblPlants:Bra013445.1	EnsemblPlants:Bra013445.1-P
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0016020	GO:GO:0016021	UniProt:M4DAD5	InterPro:PA_domain	PFAM:PF02225
PFAM:PF12662	PANTHER:PTHR22765	PANTHER:PTHR22765:SF56	SUPFAM:SSF52025	TMHMM:TMhelix	UniParc:UPI00025469EA
InterPro:cEGF	SEG:seg	:	:	:	:

Description

AT4G20110 (E=0.0) | vacuolar sorting receptor, putative

Coordinates

chrA01:+:5694737..5697907

Molecular Weight (calculated)

70245.5 Da

IEP (calculated)

5.927

GRAVY (calculated)

-0.342

Length

631 amino acids

Sequence
(BLAST)

001: MSLVNGRALT SLLAALTIIA IAMVVVDARF VVEKESIRVL NPEEMRSKHD GSIANFGLPD YGGFLIGAVV YPDSKTDGCS AFGKTFKPKF PRPTILLLDR
101: GGCYFALKAW NAQQAGAAAV LVADNKDEPL LTMDSPEESR DADGFIEKLT IPSVLIEKSF GDSLREGFKK GKNIVLKLDW RESVPHPDQR VEYELWTNSN
201: DECGARCDEQ MDFVKNFKGH AQILEKGGFT AFTPHYITWF CPFQFVNSPQ CKSQCINHGR YCAPDPEKNF REGYEGKDVV FENLRQLCVH RVANESSRSW
301: VWWDYVTDFH ARCSMKEKKY SIECAENVIK SLNLPIEKVK KCMGDPEADT DNEVLKMEQV VQLGRGERGD VTILPTLVIN NAQYRGRLER TAVLKAICAG
401: FNETSDLPIC LNTGLETNEC LENNGGCWQD KRANMTACKD TFRGRICECP VVKGVQYKGD GYTSCTPYGP ARCTINNGGC WSDTRNGATF SACSDSMSTG
501: CKCPPGFKGD GLTCEDINEC KEGLVCQCSG CKCRNTWGGH GCSCSGDRLY ISDQDTCIER NGSKTAWWLT LLILAIVAVA GLAGYLFYKY RFRSYMDSEI
601: MTIMSQYMPL ESQRAREVPS EAEPFTHNST A

Best Arabidopsis Sequence Match ( AT4G20110.1 )
(BLAST)

001: MGLVNGRASL TFLLAALTII AMVVEARFVV EKESISVLNP EEMRSKHDGS IANFGLPDYG GFLIGSVVYP DSKTDGCSAF GKTFKPKFPR PTILLLDRGG
101: CYFALKAWHA QQAGAAAVLV ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE SVPHPDKRVE YELWTNSNDE
201: CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW
301: WDYVTDFHSR CSMKEKKYSI DCAESVIKSL NLPIEKIKKC IGDPEADTEN QVLRTEQVSQ IGRGNRGDVT ILPTLVINNA QYRGRLERTA VLKAICAGFN
401: ETSEPAICLN TGLETNECLE NNGGCWQDTK ANITACQDTF RGRLCECPVV KGVQYKGDGY TSCTPYGPAR CTMNNGGCWS DTRNGLTFSA CSDSVSTGCK
501: CPEGFQGDGL TCEDINECKE RSVCQCSGCR CKNSWGGYKC SCSGDRLYIN DQDTCIERYG SKTAWWLTFL ILAIVAVAGL AGYIFYKYRF RSYMDSEIMT
601: IMSQYMPLES QRAREVPSEA EPFTL

Arabidopsis Description

VSR7VACUOLAR SORTING RECEPTOR 7 [Source:UniProtKB/TrEMBL;Acc:F4JUS0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.