Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78975 | Canola | plasma membrane | 89.65 | 89.22 |
| Bra013445.1-P | Field mustard | plasma membrane | 89.33 | 88.91 |
| CDY50060 | Canola | plasma membrane | 88.85 | 88.71 |
| VIT_01s0011g01050.t01 | Wine grape | extracellular, plasma membrane, vacuole | 69.9 | 69.68 |
| KRH37180 | Soybean | plasma membrane | 69.11 | 69.55 |
| KRH12166 | Soybean | plasma membrane | 69.27 | 69.27 |
| PGSC0003DMT400018916 | Potato | plasma membrane | 68.79 | 69.12 |
| AT1G30900.1 | Thale cress | extracellular, plasma membrane, vacuole | 68.95 | 68.62 |
| Solyc02g081970.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 69.11 | 68.03 |
| GSMUA_Achr3P23680_001 | Banana | plasma membrane | 57.01 | 63.59 |
| AT2G34940.1 | Thale cress | plasma membrane | 62.1 | 63.11 |
| Os06t0664300-01 | Rice | plasma membrane | 63.53 | 62.64 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 58.6 | 62.59 |
| Zm00001d046945_P001 | Maize | plasma membrane | 61.62 | 61.53 |
| TraesCS7A01G483700.1 | Wheat | golgi, plasma membrane | 60.67 | 60.77 |
| Os04t0611400-01 | Rice | plasma membrane | 61.15 | 60.76 |
| KXG27024 | Sorghum | plasma membrane | 59.08 | 60.62 |
| TraesCS7D01G471300.1 | Wheat | golgi | 60.67 | 60.48 |
| TraesCS7B01G387100.1 | Wheat | extracellular, plasma membrane | 60.51 | 60.32 |
| AT2G14720.1 | Thale cress | extracellular, plasma membrane, vacuole | 59.87 | 59.87 |
| TraesCS2A01G425800.2 | Wheat | mitochondrion | 60.99 | 59.75 |
| AT2G14740.1 | Thale cress | extracellular, plasma membrane, vacuole | 59.71 | 59.71 |
| TraesCS7D01G145700.2 | Wheat | cytosol | 28.5 | 59.67 |
| TraesCS2D01G423700.1 | Wheat | golgi | 60.83 | 59.59 |
| AT3G52850.1 | Thale cress | extracellular, golgi, plasma membrane | 58.92 | 59.39 |
| TraesCS2B01G446100.1 | Wheat | plasma membrane | 60.35 | 59.03 |
| TraesCS7A01G281400.1 | Wheat | cytosol, nucleus, plastid | 9.24 | 58.59 |
| HORVU7Hr1G109180.2 | Barley | mitochondrion, plasma membrane, vacuole | 60.99 | 58.38 |
| AT2G30290.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 54.14 | 53.04 |
| KXG20551 | Sorghum | plasma membrane, plastid | 61.31 | 51.13 |
| TraesCS6A01G310600.1 | Wheat | cytosol | 27.23 | 45.12 |
| TraesCS7A01G436000.1 | Wheat | mitochondrion | 14.01 | 41.71 |
| GSMUA_Achr7P03630_001 | Banana | plasma membrane | 56.37 | 34.98 |
| HORVU2Hr1G099640.3 | Barley | extracellular | 17.2 | 16.8 |
Protein Annotations
| Gene3D:2.10.25.10 | MapMan:22.5.2.1 | Gene3D:3.50.30.30 | EntrezGene:827757 | ProteinID:AEE84277.1 | ArrayExpress:AT4G20110 |
| EnsemblPlantsGene:AT4G20110 | RefSeq:AT4G20110 | TAIR:AT4G20110 | RefSeq:AT4G20110-TAIR-G | EnsemblPlants:AT4G20110.2 | TAIR:AT4G20110.2 |
| Unigene:At.32746 | InterPro:EGF-like_Ca-bd_dom | InterPro:EGF_Ca-bd_CS | UniProt:F4JUS0 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001190777.1 | InterPro:PA_domain |
| PFAM:PF02225 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0005052 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01187 | PANTHER:PTHR22765 | PANTHER:PTHR22765:SF56 |
| SMART:SM00179 | SUPFAM:SSF52025 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001E93018 | Symbol:VSR7 |
| SEG:seg | : | : | : | : | : |
Description
VSR7VACUOLAR SORTING RECEPTOR 7 [Source:UniProtKB/TrEMBL;Acc:F4JUS0]
Coordinates
chr4:+:10875233..10878729
Molecular Weight (calculated)
70260.1 Da
IEP (calculated)
5.174
GRAVY (calculated)
-0.362
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLVNGRASL TFLLAALTII AMVVEARFVV EKESISVLNP EEMRSKHDGS IANFGLPDYG GFLIGSVVYP DSKTDGCSAF GKTFKPKFPR PTILLLDRGG
101: CYFALKAWHA QQAGAAAVLV ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE SVPHPDKRVE YELWTNSNDE
201: CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW
301: WDYVTDFHSR CSMKEKKYSI DCAESYESLR LFSDLPIEKI KKCIGDPEAD TENQVLRTEQ VSQIGRGNRG DVTILPTLVI NNAQYRGRLE RTAVLKAICA
401: GFNETSEPAI CLNTGLETNE CLENNGGCWQ DTKANITACQ DTFRGRLCEC PVVKGVQYKG DGYTSCTPYG PARCTMNNGG CWSDTRNGLT FSACSDSVST
501: GCKCPEGFQG DGLTCEDINE CKERSVCQCS GCRCKNSWGG YKCSCSGDRL YINDQDTCIE RYGSKTAWWL TFLILAIVAV AGLAGYIFYK YRFRSYMDSE
601: IMTIMSQYMP LESQRAREVP SEAEPFTL
101: CYFALKAWHA QQAGAAAVLV ADNVDEPLLT MDSPEESKDA DGFIEKLTIP SVLIDKSFGD DLRQGFQKGK NIVIKLDWRE SVPHPDKRVE YELWTNSNDE
201: CGARCDEQMD FVKNFKGHAQ ILEKGGYTAF TPHYITWFCP FQFINSPHCK SQCINHGRYC APDPEDNFRE GYEGKDVVLE NLRQLCVHRV ANESSRPWVW
301: WDYVTDFHSR CSMKEKKYSI DCAESYESLR LFSDLPIEKI KKCIGDPEAD TENQVLRTEQ VSQIGRGNRG DVTILPTLVI NNAQYRGRLE RTAVLKAICA
401: GFNETSEPAI CLNTGLETNE CLENNGGCWQ DTKANITACQ DTFRGRLCEC PVVKGVQYKG DGYTSCTPYG PARCTMNNGG CWSDTRNGLT FSACSDSVST
501: GCKCPEGFQG DGLTCEDINE CKERSVCQCS GCRCKNSWGG YKCSCSGDRL YINDQDTCIE RYGSKTAWWL TFLILAIVAV AGLAGYIFYK YRFRSYMDSE
601: IMTIMSQYMP LESQRAREVP SEAEPFTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.