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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G34940.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT2G34940.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT2G34940.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G471300.1 Wheat golgi 97.62 97.62
TraesCS7A01G483700.1 Wheat golgi, plasma membrane 96.67 97.13
HORVU7Hr1G109180.2 Barley mitochondrion, plasma membrane, vacuole 96.51 92.68
TraesCS7A01G281400.1 Wheat cytosol, nucleus, plastid 13.49 85.86
TraesCS7D01G145700.2 Wheat cytosol 39.84 83.67
Os06t0664300-01 Rice plasma membrane 83.33 82.42
Zm00001d046945_P001 Maize plasma membrane 82.22 82.35
KXG20551 Sorghum plasma membrane, plastid 82.86 69.32
GSMUA_AchrUn_... Banana plasma membrane 64.13 68.71
KRH37180 Soybean plasma membrane 65.56 66.19
VIT_01s0011g01050.t01 Wine grape extracellular, plasma membrane, vacuole 65.87 65.87
KRH12166 Soybean plasma membrane 65.4 65.61
TraesCS2B01G446100.1 Wheat plasma membrane 66.83 65.58
PGSC0003DMT400018916 Potato plasma membrane 64.44 64.96
Solyc02g081970.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 64.6 63.79
CDY02347 Canola plasma membrane 62.06 62.16
Bra023151.1-P Field mustard plasma membrane 62.06 62.16
AT1G30900.1 Thale cress extracellular, plasma membrane, vacuole 62.22 62.12
CDY43178 Canola plasma membrane 61.9 62.0
TraesCS6A01G310600.1 Wheat cytosol 36.83 61.21
CDX78975 Canola plasma membrane 61.27 61.17
Bra013445.1-P Field mustard plasma membrane 60.95 60.86
CDY50060 Canola plasma membrane 60.63 60.73
AT4G20110.2 Thale cress plasma membrane 60.32 60.51
Bra039877.1-P Field mustard cytosol 30.95 59.09
TraesCS4B01G121300.2 Wheat extracellular 57.62 58.08
TraesCS5B01G145700.1 Wheat golgi 57.62 57.71
AT2G34940.1 Thale cress plasma membrane 56.35 57.44
TraesCS4B01G170000.1 Wheat plasma membrane 56.67 57.21
CDY12449 Canola cytosol 26.19 56.9
TraesCS2B01G122400.1 Wheat golgi 56.83 56.02
TraesCS1B01G148200.1 Wheat plasma membrane 55.87 55.7
CDY64650 Canola plasma membrane 55.4 55.57
Bra021940.1-P Field mustard plasma membrane 55.24 55.5
CDY43647 Canola plasma membrane 54.92 55.1
TraesCS7A01G436000.1 Wheat mitochondrion 18.1 54.03
TraesCS5B01G056400.1 Wheat extracellular 38.41 51.49
GSMUA_Achr7P03630_001 Banana plasma membrane 59.52 37.06
Protein Annotations
EnsemblPlants:TraesCS7B01G387100.1EnsemblPlantsGene:TraesCS7B01G387100Gene3D:2.10.25.10Gene3D:3.50.30.30GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EGF_Ca-bd_CSInterPro:PA_domainPANTHER:PTHR22765PANTHER:PTHR22765:SF56PFAM:PF02225
ScanProsite:PS01187SEG:segSignalP:SignalP-noTMSUPFAM:SSF52025TIGR:cd00054TMHMM:TMhelix
MapMan:22.5.2.1:::::
Description
No Description!
Coordinates
chr7B:-:653017377..653021361
Molecular Weight (calculated)
69408.1 Da
IEP (calculated)
6.099
GRAVY (calculated)
-0.377
Length
630 amino acids
Sequence
(BLAST)
001: MGGGGGARQF LAAVLAVCVA AAMVAPARGR FVVEKSSVRV LAPEHIRGHH DAAIGNFGVP DYGGTLTGVV LYPDKKATGC AEFPGKFKSK SGRPVVLLLD
101: RGECYFALKS WNAQQAGAAA VLIADTVDEQ LLTMDTPEAS PDTRYLDKLN IPSALVNRAF GESLKRMAEK ADAEGEVVVK LDWRESMPHP DERVEYELWT
201: NSNDECGPRC DEQAAFVKSF RGHAQILERG GYARFTPHYI TWYCPEAFRL TRQCQSQCIN HGRYCAPDPE EDFGEGYEGK QVVVENLRQL CVHRVANESG
301: RPWAWWDFAM DYKLRCSMKE KKYSKACAEE VVTALGLSLD KVLACMGDPD ADADNAVLSK EQEDQIGRGS RGDVTILPTL VINDVQYRGK LERTAVLKAV
401: CAGFKERTEP QVCLSHDMET NECLHRNGGC WRDEATNVTA CRDTYRGRVC ECPVVNGVRY DGDGYTHCKA VGPGRCALNH GGCWSETKGE RTFSACSDTA
501: LSGCRCPPGF QGDGHKCEDL DECKDKLACT CPDCHCKNTW GSYECGCRGN QVYIRGEDVC VANSMSRFGW LVAVLAVSCA AGLGVAGFVF YKYRLRSYMD
601: SEIMAIMSQY MPLDSQNNEH QPLRQHASDA
Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)
001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A
Arabidopsis Description
VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.