CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023151.1-P	Field mustard	plasma membrane	99.68	99.68
CDY43178	Canola	plasma membrane	99.36	99.36
AT1G30900.1	Thale cress	extracellular, plasma membrane, vacuole	94.28	93.98
CDY12449	Canola	cytosol	36.41	78.97
CDY64650	Canola	plasma membrane	72.5	72.61
CDY43647	Canola	plasma membrane	72.02	72.13
CDY50060	Canola	plasma membrane	68.2	68.2
CDX78975	Canola	plasma membrane	67.73	67.51
CDY62643	Canola	mitochondrion	9.86	65.26
GSMUA_Achr3P23680_001	Banana	plasma membrane	58.19	65.01
Os06t0664300-01	Rice	plasma membrane	65.18	64.36
GSMUA_AchrUn_...	Banana	plasma membrane	59.78	63.95
Zm00001d046945_P001	Maize	plasma membrane	63.59	63.59
TraesCS7D01G471300.1	Wheat	golgi	62.16	62.06
TraesCS7B01G387100.1	Wheat	extracellular, plasma membrane	62.16	62.06
TraesCS7A01G483700.1	Wheat	golgi, plasma membrane	61.69	61.88
TraesCS7A01G281400.1	Wheat	cytosol, nucleus, plastid	9.7	61.62
CDY37219	Canola	extracellular, golgi, plasma membrane	60.57	61.06
CDX81459	Canola	plasma membrane	60.25	60.74
CDX93144	Canola	extracellular, plasma membrane, vacuole	58.66	60.49
Os04t0611400-01	Rice	plasma membrane	60.73	60.44
HORVU7Hr1G109180.2	Barley	mitochondrion, plasma membrane, vacuole	62.0	59.45
TraesCS7D01G145700.2	Wheat	cytosol	28.3	59.33
CDY65441	Canola	plasma membrane	59.46	59.27
KXG27024	Sorghum	plasma membrane	56.92	58.5
TraesCS2B01G446100.1	Wheat	plasma membrane	59.62	58.41
CDX78128	Canola	plasma membrane	57.87	58.24
TraesCS2A01G425800.2	Wheat	mitochondrion	59.14	58.03
CDX73599	Canola	plasma membrane	57.55	57.92
CDY13344	Canola	plasma membrane	57.39	57.76
CDY60753	Canola	plasma membrane	56.92	57.74
TraesCS2D01G423700.1	Wheat	golgi	58.82	57.72
CDX67539	Canola	plasma membrane	57.23	57.6
CDX91478	Canola	plasma membrane	56.76	57.58
CDY70452	Canola	cytosol	9.38	57.28
CDY42565	Canola	cytosol	9.38	57.28
CDX99194	Canola	cytosol	9.38	57.28
CDY04821	Canola	mitochondrion, plasma membrane	55.33	54.8
CDY38158	Canola	cytosol, plasma membrane	25.91	53.97
KXG20551	Sorghum	plasma membrane, plastid	64.23	53.65
CDY10980	Canola	cytosol	13.83	48.88
CDY62642	Canola	cytosol, plasma membrane, plastid	10.65	47.86
CDY22565	Canola	nucleus	8.43	46.49
CDY38157	Canola	mitochondrion	27.19	46.22
TraesCS6A01G310600.1	Wheat	cytosol	26.55	44.06
TraesCS7A01G436000.1	Wheat	mitochondrion	14.15	42.18
GSMUA_Achr7P03630_001	Banana	plasma membrane	57.55	35.77
HORVU2Hr1G099640.3	Barley	extracellular	17.33	16.95

Protein Annotations

EnsemblPlants:CDY02347	EnsemblPlantsGene:GSBRNA2T00113832001	Gene3D:2.10.25.10	Gene3D:3.50.30.30	GO:A0A078EMH3	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS	InterPro:PA_domain	PANTHER:PTHR22765
PANTHER:PTHR22765:SF56	PFAM:PF02225	ProteinID:CDY02347	ProteinID:CDY02347.1	ScanProsite:PS01187	SignalP:SignalP-TM
SMART:SM00179	SUPFAM:SSF52025	TMHMM:TMhelix	UniParc:UPI0004EE9FB3	MapMan:22.5.2.1	:

Description

BnaA09g25550D

Coordinates

chrLK031933:+:794749..798801

Molecular Weight (calculated)

69542.6 Da

IEP (calculated)

5.041

GRAVY (calculated)

-0.319

Length

629 amino acids

Sequence
(BLAST)

001: MSLISKGATL ALFLALTMVV NGVFGRFIVE KSSVTILSPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAFGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ KSGAAAVLIA DNVDESLITM DSPEESKEAD DFIEKLTIPS ALIDLSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHRVG KEINKSWVWW
301: DYVTDFHIRC SMKEKKYTKE CAESVVESLG LPLDKIKKCM GDPAADVENE VLKGEQALQV GQGDRGDVTI LPTLIINNAQ YRGKLESSSV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWQDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SLNQGGCWSE TKKGLTFSAC SNTETSGCRC
501: PSGFKGDGLK CEDIDECKEK SACQCDGCKC NNKWGSFECK CSGNRLYMKE QDTCIEKSGS GIGWFFTFVI LAAVGGICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QQLRLTSAA

Best Arabidopsis Sequence Match ( AT1G30900.1 )
(BLAST)

001: MSLIHKGATL ALFLALTMVV NGVFGRFIVE KSSVTILNPL AMRSKHDAAI ANFGVPNYGG YMIGSVVYAG QGAYGCDSFD KTFKPKFPRP TILIIDRGEC
101: YFALKVWNGQ QSGVAAVLVA DNVDEPLITM DSPEESKEAD DFIEKLNIPS ALIDFSFANT LKQALKKGEE VVLKIDWSES LPHPDERVEY ELWTNTNDEC
201: GARCDEQMNF VKNFKGHAQI LEKGGYSLFT PHYITWFCPK DYVSSNQCKS QCINQGRYCA PDPEQDFGDG YDGKDIVFEN LRQLCVHKVA KENNRSWVWW
301: DYVTDFHIRC SMKEKKYSKE CAERVVESLG LPLDKIKKCI GDPDANVENE VLKAEQALQV GQGDRGDVTI LPTLIVNNAQ YRGKLERNAV LKAICSGFKE
401: RTEPGICLSG DIETNECLEA NGGCWEDKKS NVTACKDTFR GRVCECPVVN GVQYKGDGYT SCEPYGPARC SINQGGCWSE TKKGLTFSAC SNLETSGCRC
501: PPGFKGDGLK CEDIDECKEQ SACQCDGCNC KNKWGGFECK CSGNRLYMKE QDTCIERSGS RIGWFPTFVI LAAVASICVG GYVFYKYRLR SYMDSEIMAI
601: MSQYMPLESQ NTTDPMTGES QHQQLRLTSA A

Arabidopsis Description

VSR6Vacuolar-sorting receptor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYH7]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.