Factsheet for Solyc09g015670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plastid: 26371478

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077180	Potato	cytosol	94.2	96.85
Solyc10g074980.1.1	Tomato	extracellular	86.31	85.9
KRH00437	Soybean	endoplasmic reticulum, golgi, plasma membrane	73.27	73.51
Bra028917.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	64.25	72.28
KRH40723	Soybean	extracellular, golgi, plasma membrane	72.62	72.28
KRH48733	Soybean	extracellular, golgi, plasma membrane	71.98	71.86
CDY62643	Canola	mitochondrion	10.79	70.53
KRH64888	Soybean	endoplasmic reticulum, golgi, plasma membrane	70.85	70.51
CDY04821	Canola	mitochondrion, plasma membrane	71.5	69.92
AT2G30290.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	70.53	68.33
Solyc01g107130.2.1	Tomato	nucleus	69.08	68.1
CDY38158	Canola	cytosol, plasma membrane	30.92	63.58
CDY62642	Canola	cytosol, plasma membrane, plastid	14.01	62.14
CDY38157	Canola	mitochondrion	36.23	60.81
Solyc02g081970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	59.74	58.15
CDY42565	Canola	cytosol	9.34	56.31
CDY70452	Canola	cytosol	9.34	56.31
CDX99194	Canola	cytosol	9.34	56.31
Bra039875.1-P	Field mustard	cytosol	9.34	56.31
Bra039898.1-P	Field mustard	cytosol	34.62	56.14
Bra009645.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	14.98	52.25
HORVU5Hr1G046470.1	Barley	cytosol, mitochondrion	4.67	50.0
CDY10980	Canola	cytosol	13.85	48.31
Zm00001d053767_P001	Maize	mitochondrion	9.98	44.29
VIT_11s0052g00060.t01	Wine grape	extracellular	9.5	38.56

Protein Annotations

Gene3D:2.10.25.10	MapMan:22.5.2.1	Gene3D:3.40.30.10	Gene3D:3.50.30.30	InterPro:EGF-like_Ca-bd_dom	InterPro:EGF_Ca-bd_CS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
UniProt:K4CS37	InterPro:PA_domain	PFAM:PF02225	ScanProsite:PS01187	PFscan:PS51257	PANTHER:PTHR22765
PANTHER:PTHR22765:SF57	SMART:SM00179	SUPFAM:SSF52025	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g015670.2	EnsemblPlants:Solyc09g015670.2.1
TMHMM:TMhelix	UniParc:UPI000276BF18	:	:	:	:

Description

No Description!

Coordinates

chr9:-:10672771..10678948

Molecular Weight (calculated)

69082.0 Da

IEP (calculated)

5.101

GRAVY (calculated)

-0.353

Length

621 amino acids

Sequence
(BLAST)

001: MKVGFLVCIL FVMCGCCMGR FVVEKNSLRV TSPDSIKEVY ECAIGNFGVP QYGGTLVGNV MYPKSNKKSC NNFSDFDIFY KSKPGGRPVF LLVDRGDCFF
101: TLKAWNAQQA GAGAILVADN RVEPLITMDT PEEEDAKADY LQDITIPSAL ISKSLGDSIK RELSKGELVN INLDWREALP HPDDRVEYEF WTNSNDECGP
201: KCESQREFVK NFKGAAQILE QKGYTQFSPH YITWYCPEAF ILSKQCKSQC INHGRYCAPD PEQDFSKGYD GKDVVLQNLR QACFFKVAND SGKPWLWWDY
301: VTDFAIRCPM KEKKYTKGCA DQVIKSLGFD VKQIEKCVGD PEADTDNPVL KVEQDIQIGK GARGDVTILP TLVINNRQYR GKLDKGAVLK AICSGFEETT
401: EPAICLTEEI ETNECLESNG GCWQDEAANI TACQDTFRGR VCECPVVQGV KFVGDGYTHC EPSGALRCEI NNGGCWKGTQ NSRAYSACID DHTKGCKCPP
501: GFKGDGVNSC EDIDECKEKL ACQCAECKCK NTWGSYDCSC SANLLYMHEH DTCISKDAKS EFSWGLVWTI ILGLAVAGVS AYAVYKYRIR RYMDSEIRAI
601: MAQYMPLGQG EGATNVPHGN V

Best Arabidopsis Sequence Match ( AT3G52850.1 )
(BLAST)

001: MKLGLFTLSF LLILNLAMGR FVVEKNNLKV TSPDSIKGIY ECAIGNFGVP QYGGTLVGTV VYPKSNQKAC KSYSDFDISF KSKPGRLPTF VLIDRGDCYF
101: TLKAWIAQQA GAAAILVADS KAEPLITMDT PEEDKSDADY LQNITIPSAL ITKTLGDSIK SALSGGDMVN MKLDWTESVP HPDERVEYEL WTNSNDECGK
201: KCDTQIEFLK NFKGAAQILE KGGHTQFTPH YITWYCPEAF TLSKQCKSQC INHGRYCAPD PEQDFTKGYD GKDVVVQNLR QACVYRVMND TGKPWVWWDY
301: VTDFAIRCPM KEKKYTKECA DGIIKSLGID LKKVDKCIGD PEADVENPVL KAEQESQIGK GSRGDVTILP TLVVNNRQYR GKLEKGAVLK AMCSGFQEST
401: EPAICLTEDL ETNECLENNG GCWQDKAANI TACRDTFRGR LCECPTVQGV KFVGDGYTHC KASGALHCGI NNGGCWRESR GGFTYSACVD DHSKDCKCPL
501: GFKGDGVKNC EDVDECKEKT VCQCPECKCK NTWGSYECSC SNGLLYMREH DTCIGSGKVG TTKLSWSFLW ILIIGVGVAG LSGYAVYKYR IRSYMDAEIR
601: GIMAQYMPLE SQPPNTSGHH MDI

Arabidopsis Description

VSR1Vacuolar-sorting receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P93026]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.