Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002424_P002 | Maize | nucleus | 92.99 | 92.31 |
| Zm00001d026245_P001 | Maize | nucleus | 89.67 | 91.35 |
| TraesCS2A01G436000.1 | Wheat | nucleus | 28.41 | 77.0 |
| Os04t0602300-01 | Rice | cytosol, nucleus | 57.56 | 76.85 |
| TraesCS2B01G457200.1 | Wheat | nucleus | 73.8 | 74.35 |
| TraesCS2D01G433900.1 | Wheat | nucleus | 73.43 | 72.89 |
| HORVU2Hr1G101600.2 | Barley | nucleus | 71.22 | 71.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.34 | 59.55 |
| GSMUA_Achr7P04840_001 | Banana | nucleus | 57.56 | 51.32 |
| KRH76406 | Soybean | nucleus | 57.93 | 50.97 |
| VIT_02s0087g00140.t01 | Wine grape | nucleus | 53.87 | 46.06 |
| PGSC0003DMT400011408 | Potato | nucleus | 47.97 | 40.62 |
| Solyc08g005900.2.1 | Tomato | nucleus | 46.13 | 38.34 |
| OQU77323 | Sorghum | nucleus | 31.73 | 20.19 |
| EES11021 | Sorghum | nucleus | 16.97 | 12.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.20 | EntrezGene:8072280 | UniProt:C5YF69 | ncoils:Coil | EnsemblPlants:EES12791 |
| ProteinID:EES12791 | ProteinID:EES12791.1 | GO:GO:0000981 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR017877 | InterPro:Myb-like_dom | PFAM:PF13837 | PFscan:PS50090 |
| PANTHER:PTHR45227 | EnsemblPlantsGene:SORBI_3006G204300 | UniParc:UPI0001A874A0 | RefSeq:XP_002448463.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:55455064..55457618
Molecular Weight (calculated)
31998.8 Da
IEP (calculated)
8.085
GRAVY (calculated)
-1.250
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEAGGAGAG GRDERVPQWG AQETRELIMA RGEMERETVA ARRSAKTMWE AVAARLRERG YRRTAEQCKC KWKNLVNRYK GKETSDPEIG RQCPFFEELH
101: AVFTERARNM QRQLLESESG ASVKRKLKRP GGDRSSGESD DEDDGGEESD DEKPMHSRKR KADDKKQQYQ RMSEKSRAGI SSIHELLQDF LVQQQHIDVR
201: WQEMMERRAQ ERVVFEQQWR QTMQKLEQER LLLEHSWMER EEQRRMREEA RAEKRDALLT TLLNKLLQED L
101: AVFTERARNM QRQLLESESG ASVKRKLKRP GGDRSSGESD DEDDGGEESD DEKPMHSRKR KADDKKQQYQ RMSEKSRAGI SSIHELLQDF LVQQQHIDVR
201: WQEMMERRAQ ERVVFEQQWR QTMQKLEQER LLLEHSWMER EEQRRMREEA RAEKRDALLT TLLNKLLQED L
001: MDGHQHHHLH QLQYLNKHHL HTQSQTPEIA SPVAVGDRFP QWSVEETKEL IGIRGELDQT FMETKRNKLL WEVISNKMRD KSFPRSPEQC KCKWKNLVTR
101: FKGCETMEAE TARQQFPFYD DMQNIFTTRM QRMLWAESEG GGGGTSGAAR KREYSSDEEE ENVNEELVDV SNDPKILNPK KNIAKKRKGG SNSSNSNNGV
201: REVLEEFMRH QVRMESEWRE GWEAREKERA EKEEEWRRKM EELEKERLAM ERMWRDREEQ RRSREEMRAE KRDSLINALL AKLTRDGSL
101: FKGCETMEAE TARQQFPFYD DMQNIFTTRM QRMLWAESEG GGGGTSGAAR KREYSSDEEE ENVNEELVDV SNDPKILNPK KNIAKKRKGG SNSSNSNNGV
201: REVLEEFMRH QVRMESEWRE GWEAREKERA EKEEEWRRKM EELEKERLAM ERMWRDREEQ RRSREEMRAE KRDSLINALL AKLTRDGSL
Arabidopsis Description
GT-3BTrihelix transcription factor GT-3b [Source:UniProtKB/Swiss-Prot;Acc:O80450]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.