Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12791 | Sorghum | nucleus | 91.35 | 89.67 |
| Zm00001d002424_P002 | Maize | nucleus | 86.84 | 84.62 |
| TraesCS2A01G436000.1 | Wheat | nucleus | 28.2 | 75.0 |
| Os04t0602300-01 | Rice | cytosol, nucleus | 56.77 | 74.38 |
| TraesCS2B01G457200.1 | Wheat | nucleus | 71.43 | 70.63 |
| TraesCS2D01G433900.1 | Wheat | nucleus | 71.05 | 69.23 |
| HORVU2Hr1G101600.2 | Barley | nucleus | 68.42 | 67.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.49 | 55.0 |
| KRH76406 | Soybean | nucleus | 56.77 | 49.03 |
| GSMUA_Achr7P04840_001 | Banana | nucleus | 54.14 | 47.37 |
| VIT_02s0087g00140.t01 | Wine grape | nucleus | 51.5 | 43.22 |
| PGSC0003DMT400011408 | Potato | nucleus | 47.37 | 39.38 |
| Solyc08g005900.2.1 | Tomato | nucleus | 45.86 | 37.42 |
| Zm00001d035457_P001 | Maize | nucleus | 30.45 | 24.18 |
| Zm00001d025720_P002 | Maize | nucleus | 16.17 | 11.35 |
Protein Annotations
| EnsemblPlants:Zm00001d026245_P001 | EnsemblPlants:Zm00001d026245_T001 | EnsemblPlantsGene:Zm00001d026245 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| PANTHER:PTHR45227 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:AQK45902.1 | SEG:seg | UniParc:UPI000845584A |
| UniProt:A0A1D6JDK2 | MapMan:15.5.20 | : | : | : | : |
Description
Trihelix-transcription factor 10Trihelix transcription factor GT-3b
Coordinates
chr10:-:141743929..141746414
Molecular Weight (calculated)
31237.9 Da
IEP (calculated)
8.498
GRAVY (calculated)
-1.193
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEAGGAGAG GRDERVPQWG VQETRELIVA RREMEREAVA ARRSAKTMWE AVAARLRERG YRRTAEQCKC KWKNLGKETS DPENGRQCPF FDELHAVFTD
101: RARDMQRQLL ESESGASVKR KLKQPGGDRS SGLSDDEGNG GEESDEEKPL PSRKRKADDK KQQHQRMSGK SRAGFSSIHE LLQDFLVQQQ HIDVWWREMM
201: ERRAQERIVF EQQWRQTMQK LEQERLLLEH SWMEREEQRR MREETRAEKR DALLTALLNK LLQEDL
101: RARDMQRQLL ESESGASVKR KLKQPGGDRS SGLSDDEGNG GEESDEEKPL PSRKRKADDK KQQHQRMSGK SRAGFSSIHE LLQDFLVQQQ HIDVWWREMM
201: ERRAQERIVF EQQWRQTMQK LEQERLLLEH SWMEREEQRR MREETRAEKR DALLTALLNK LLQEDL
001: MDGHQHHHLH QLQYLNKHHL HTQSQTPEIA SPVAVGDRFP QWSVEETKEL IGIRGELDQT FMETKRNKLL WEVISNKMRD KSFPRSPEQC KCKWKNLVTR
101: FKGCETMEAE TARQQFPFYD DMQNIFTTRM QRMLWAESEG GGGGTSGAAR KREYSSDEEE ENVNEELVDV SNDPKILNPK KNIAKKRKGG SNSSNSNNGV
201: REVLEEFMRH QVRMESEWRE GWEAREKERA EKEEEWRRKM EELEKERLAM ERMWRDREEQ RRSREEMRAE KRDSLINALL AKLTRDGSL
101: FKGCETMEAE TARQQFPFYD DMQNIFTTRM QRMLWAESEG GGGGTSGAAR KREYSSDEEE ENVNEELVDV SNDPKILNPK KNIAKKRKGG SNSSNSNNGV
201: REVLEEFMRH QVRMESEWRE GWEAREKERA EKEEEWRRKM EELEKERLAM ERMWRDREEQ RRSREEMRAE KRDSLINALL AKLTRDGSL
Arabidopsis Description
GT-3BTrihelix transcription factor GT-3b [Source:UniProtKB/Swiss-Prot;Acc:O80450]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.