Factsheet for GSMUA_Achr11P15560_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20280_001	Banana	nucleus	28.3	71.43
GSMUA_AchrUn_...	Banana	nucleus	35.85	57.58
Zm00001d031625_P001	Maize	nucleus	28.3	56.25
GSMUA_Achr8P09250_001	Banana	nucleus	34.59	43.65
HORVU7Hr1G054390.1	Barley	nucleus	35.85	37.01
GSMUA_Achr11P...	Banana	nucleus	32.7	33.99
Os08t0531900-01	Rice	nucleus	38.99	33.88
GSMUA_Achr2P11820_001	Banana	nucleus	29.56	33.81
GSMUA_Achr11P...	Banana	nucleus	32.7	31.9
GSMUA_Achr11P...	Banana	nucleus	28.3	31.25
HORVU7Hr1G054320.2	Barley	nucleus	37.74	30.93
TraesCS7A01G260900.1	Wheat	nucleus	37.11	28.78
GSMUA_Achr10P...	Banana	nucleus	35.85	28.22
TraesCS7B01G158900.1	Wheat	nucleus	37.74	27.65
GSMUA_Achr8P12280_001	Banana	nucleus	33.33	27.46
TraesCS7D01G261900.1	Wheat	nucleus	37.74	27.4
GSMUA_Achr1P03630_001	Banana	nucleus	35.85	27.01
GSMUA_Achr2P04340_001	Banana	nucleus	35.85	26.76
GSMUA_Achr11P...	Banana	nucleus	34.59	26.44
GSMUA_Achr1P24070_001	Banana	nucleus	34.59	25.94
GSMUA_Achr5P10250_001	Banana	nucleus	33.33	24.54
KXG25532	Sorghum	nucleus, plastid	35.85	22.71
GSMUA_Achr11P...	Banana	nucleus	7.55	7.55

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	GO:GO:0000003	GO:GO:0000977	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	GO:GO:0048576	EnsemblPlantsGene:GSMUA_Achr11G15560_001	EnsemblPlants:GSMUA_Achr11P15560_001	EnsemblPlants:GSMUA_Achr11T15560_001	InterPro:IPR002100
InterPro:IPR036879	UniProt:M0RSI6	InterPro:MADS_MEF2-like	PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066
PANTHER:PTHR11945	PANTHER:PTHR11945:SF213	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf
UniParc:UPI000295F884	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G15560_001]

Coordinates

chr11:-:17248073..17253508

Molecular Weight (calculated)

17788.4 Da

IEP (calculated)

10.452

GRAVY (calculated)

-0.025

Length

159 amino acids

Sequence
(BLAST)

001: MAPRRGKVEL RRIEDRTSRQ VRFSKRRSGL FKKAYELAVL CDAEVGLLVF SPAGKLYEFS SVSSQCTSAS SHWVFLMRTT FDSHRGYFTS IINPASLRRS
101: TSSEIAFCRS GANFLGLCFI GLAPGSMLSW CWATSWSIPG ISLEDHTNTS VFLLRKSIS

Best Arabidopsis Sequence Match ( AT4G11880.2 )
(BLAST)

001: MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS SSIPKTVERY QKRIQDLGSN HKRNDNSQQS KDETYGLARK
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKVTCS FFINLVQMYW SGTNHISHN

Arabidopsis Description

AGL14Agamous-like MADS-box protein AGL14 [Source:UniProtKB/Swiss-Prot;Acc:Q38838]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.