Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G158900.1 | Wheat | nucleus | 94.63 | 89.4 |
| TraesCS7D01G261900.1 | Wheat | nucleus | 94.63 | 88.58 |
| HORVU7Hr1G054320.2 | Barley | nucleus | 73.66 | 77.84 |
| HORVU7Hr1G054390.1 | Barley | nucleus | 56.59 | 75.32 |
| Zm00001d031625_P001 | Maize | nucleus | 26.83 | 68.75 |
| Solyc10g017640.1.1 | Tomato | nucleus | 20.0 | 67.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.83 | 55.56 |
| Os08t0531900-01 | Rice | nucleus | 48.29 | 54.1 |
| KRH48297 | Soybean | nucleus | 23.41 | 53.93 |
| TraesCS3A01G434700.1 | Wheat | nucleus | 26.34 | 52.94 |
| TraesCS3A01G434400.1 | Wheat | nucleus | 33.17 | 40.72 |
| TraesCS3A01G435000.1 | Wheat | nucleus | 33.17 | 40.72 |
| TraesCS3A01G434900.1 | Wheat | nucleus | 32.68 | 40.12 |
| KXG25532 | Sorghum | nucleus, plastid | 45.85 | 37.45 |
| GSMUA_Achr11P... | Banana | nucleus | 28.78 | 37.11 |
| TraesCS3A01G432900.1 | Wheat | mitochondrion, nucleus | 29.27 | 36.14 |
| TraesCS5A01G520200.1 | Wheat | nucleus, plastid | 35.12 | 35.64 |
| KRH40554 | Soybean | nucleus | 30.73 | 29.86 |
| KRH00625 | Soybean | nucleus | 30.24 | 29.67 |
| TraesCS5A01G515500.1 | Wheat | nucleus | 31.22 | 29.09 |
| TraesCS1A01G199600.2 | Wheat | nucleus | 29.76 | 26.52 |
| PGSC0003DMT400000028 | Potato | nucleus | 28.29 | 25.89 |
| TraesCS1A01G199900.1 | Wheat | nucleus | 28.78 | 25.88 |
| CDY37054 | Canola | nucleus | 26.83 | 25.82 |
| CDY27368 | Canola | nucleus | 26.83 | 25.82 |
| Bra039324.1-P | Field mustard | nucleus | 26.83 | 25.82 |
| PGSC0003DMT400026576 | Potato | nucleus | 26.34 | 25.23 |
| Bra000393.1-P | Field mustard | nucleus | 25.85 | 24.88 |
| CDY60689 | Canola | nucleus | 25.85 | 24.88 |
| CDY53886 | Canola | nucleus | 25.85 | 24.88 |
| AT2G45660.1 | Thale cress | nucleus | 25.85 | 24.77 |
| CDY69077 | Canola | nucleus | 25.37 | 24.41 |
| CDX74755 | Canola | nucleus | 25.37 | 24.41 |
| Bra004928.1-P | Field mustard | nucleus | 25.37 | 24.41 |
| KRH65189 | Soybean | nucleus | 27.8 | 24.05 |
| TraesCS6A01G011700.1 | Wheat | nucleus | 30.73 | 24.05 |
| KRH48299 | Soybean | nucleus | 6.83 | 10.22 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
| PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF359 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EnsemblPlantsGene:TraesCS7A01G260900 | EnsemblPlants:TraesCS7A01G260900.1 | TIGR:cd00265 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:254390155..254431999
Molecular Weight (calculated)
23307.6 Da
IEP (calculated)
5.120
GRAVY (calculated)
-0.691
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDVGRRRM QQQQEEEEDE RLKAAAAAVE EGGGKMKRKR GRVELRRIED RTSRQVRFSK RRSGLFKKAF ELSVLCDAEV ALVVFSPAGR LYEFVSSDTS
101: VEQIFGRCKD IPDTIIDDLN IAARDSRGYC NIQLDLNEQS VPESVSELNS FAQMALELDV KEMSMAELTR FEEIVREALA AVKARLRRDP QKKGDNWSGQ
201: ESGKE
101: VEQIFGRCKD IPDTIIDDLN IAARDSRGYC NIQLDLNEQS VPESVSELNS FAQMALELDV KEMSMAELTR FEEIVREALA AVKARLRRDP QKKGDNWSGQ
201: ESGKE
001: MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS SSIPKTVERY QKRIQDLGSN HKRNDNSQQS KDETYGLARK
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKVTCS FFINLVQMYW SGTNHISHN
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKVTCS FFINLVQMYW SGTNHISHN
Arabidopsis Description
AGL14Agamous-like MADS-box protein AGL14 [Source:UniProtKB/Swiss-Prot;Acc:Q38838]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.