Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042315_P001 | Maize | nucleus | 42.06 | 75.71 |
| GSMUA_Achr5P20280_001 | Banana | nucleus | 34.92 | 69.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.86 | 54.55 |
| HORVU4Hr1G085450.1 | Barley | nucleus | 37.3 | 48.45 |
| TraesCS3A01G434700.1 | Wheat | nucleus | 38.89 | 48.04 |
| HORVU4Hr1G085370.1 | Barley | nucleus | 38.1 | 44.44 |
| HORVU3Hr1G095080.3 | Barley | plastid | 39.68 | 43.1 |
| HORVU3Hr1G095240.2 | Barley | nucleus | 49.21 | 38.99 |
| TraesCS3D01G428000.1 | Wheat | nucleus | 48.41 | 38.36 |
| TraesCS3B01G469700.1 | Wheat | nucleus | 50.79 | 38.32 |
| HORVU3Hr1G095200.4 | Barley | nucleus | 50.79 | 38.32 |
| TraesCS3D01G427900.1 | Wheat | nucleus | 50.0 | 37.72 |
| TraesCS3A01G434400.1 | Wheat | nucleus | 50.0 | 37.72 |
| TraesCS3D01G427700.1 | Wheat | mitochondrion, nucleus | 49.21 | 37.35 |
| TraesCS3A01G435000.1 | Wheat | nucleus | 49.21 | 37.13 |
| TraesCS3B01G470000.1 | Wheat | nucleus | 48.41 | 36.53 |
| EES01980 | Sorghum | nucleus | 46.83 | 36.2 |
| TraesCS3A01G434900.1 | Wheat | nucleus | 47.62 | 35.93 |
| TraesCS4B01G351500.1 | Wheat | nucleus | 45.24 | 34.76 |
| Os01t0922800-01 | Rice | nucleus | 45.24 | 34.76 |
| GSMUA_Achr11P... | Banana | nucleus | 43.65 | 34.59 |
| Zm00001d039913_P002 | Maize | nucleus | 46.03 | 33.33 |
| OQU86329 | Sorghum | nucleus | 45.24 | 33.33 |
| GSMUA_Achr11P... | Banana | nucleus | 39.68 | 32.68 |
| GSMUA_Achr11P... | Banana | nucleus | 35.71 | 31.25 |
| GSMUA_Achr2P11820_001 | Banana | nucleus | 34.13 | 30.94 |
| TraesCS3A01G432900.1 | Wheat | mitochondrion, nucleus | 39.68 | 30.12 |
| GSMUA_Achr11P... | Banana | nucleus | 38.89 | 30.06 |
| TraesCS5A01G520200.1 | Wheat | nucleus, plastid | 46.83 | 29.21 |
| TraesCS4D01G346300.1 | Wheat | nucleus | 46.03 | 28.02 |
| GSMUA_Achr8P12280_001 | Banana | nucleus | 38.1 | 24.87 |
| GSMUA_Achr10P... | Banana | nucleus | 37.3 | 23.27 |
| GSMUA_Achr2P04340_001 | Banana | nucleus | 38.89 | 23.0 |
| GSMUA_Achr1P24070_001 | Banana | nucleus | 38.1 | 22.64 |
| GSMUA_Achr11P... | Banana | nucleus | 36.51 | 22.12 |
| GSMUA_Achr1P03630_001 | Banana | nucleus | 34.13 | 20.38 |
| GSMUA_Achr5P10250_001 | Banana | nucleus | 34.92 | 20.37 |
| HORVU3Hr1G095090.1 | Barley | cytosol, mitochondrion, nucleus | 46.03 | 17.21 |
| GSMUA_Achr11P... | Banana | nucleus | 4.76 | 3.77 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | GO:GO:0048576 | EnsemblPlantsGene:GSMUA_Achr8G09250_001 | EnsemblPlants:GSMUA_Achr8P09250_001 | EnsemblPlants:GSMUA_Achr8T09250_001 | InterPro:IPR002100 |
| InterPro:IPR036879 | UniProt:M0TNX8 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF213 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0002953657 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G09250_001]
Coordinates
chr8:+:6390574..6391218
Molecular Weight (calculated)
14307.5 Da
IEP (calculated)
11.365
GRAVY (calculated)
-0.072
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRGRVELR RIENRISRQV RFSKRRGGLF KKAYELAVLC DAEVALVVFS PAGKLYEFSS VLRRQGGRTR LPMRERERGL SVFWGRSNTA AFFSLSVDCI
101: VVDSDLPYHF SGMCTAVLFV VSRKTA
101: VVDSDLPYHF SGMCTAVLFV VSRKTA
001: MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL
Arabidopsis Description
AGL6AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.