Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P00700_001 | Banana | nucleus | 27.12 | 25.81 |
| GSMUA_Achr1P14780_001 | Banana | nucleus | 25.42 | 23.81 |
| GSMUA_Achr8P33850_001 | Banana | nucleus | 26.27 | 20.81 |
| GSMUA_Achr1P26550_001 | Banana | nucleus | 24.58 | 20.42 |
| GSMUA_Achr7P03800_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 22.88 | 19.01 |
| GSMUA_Achr7P09030_001 | Banana | nucleus | 24.58 | 18.59 |
| GSMUA_Achr3P31070_001 | Banana | cytosol, nucleus, plastid | 31.36 | 17.54 |
| GSMUA_Achr7P25620_001 | Banana | nucleus | 31.36 | 15.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 25.42 | 15.0 |
| GSMUA_Achr2P16730_001 | Banana | nucleus | 26.27 | 14.9 |
| GSMUA_Achr6P27250_001 | Banana | cytosol, extracellular, nucleus | 28.81 | 14.66 |
| GSMUA_Achr8P24880_001 | Banana | nucleus | 26.27 | 14.22 |
| GSMUA_Achr4P30820_001 | Banana | nucleus | 29.66 | 12.92 |
| GSMUA_Achr2P15750_001 | Banana | plastid | 12.71 | 11.28 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr11G17770_001 | EnsemblPlants:GSMUA_Achr11P17770_001 |
| EnsemblPlants:GSMUA_Achr11T17770_001 | InterPro:IPR000679 | InterPro:IPR013088 | UniProt:M0RT57 | PFAM:PF00320 | PFscan:PS50114 |
| PANTHER:PTHR10071 | PANTHER:PTHR10071:SF306 | SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI000295F016 | InterPro:Znf_GATA |
| InterPro:Znf_NHR/GATA | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G17770_001]
Coordinates
chr11:-:19335713..19336839
Molecular Weight (calculated)
12770.3 Da
IEP (calculated)
9.931
GRAVY (calculated)
-0.453
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYDLVGFSS TPTSSSSSSP KPLVERDFLS RVEERNYGMS GLDVSLSLSP PLMVIGKRCS ACGETKTPLW RNGPDGPKSL CNACGIRYRK EAKKINTNLT
101: LAPPDHVVQL SAKGNRAR
101: LAPPDHVVQL SAKGNRAR
001: MMGYQTNSNF SMFFSSENDD QNHHNYDPYN NFSSSTSVDC TLSLGTPSTR LDDHHRFSSA NSNNISGDFY IHGGNAKTSS YKKGGVAHSL PRRCASCDTT
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
101: STPLWRNGPK GPKSLCNACG IRFKKEERRA TARNLTISGG GSSAAEVPVE NSYNGGGNYY SHHHHHYASS SPSWAHQNTQ RVPYFSPVPE MEYPYVDNVT
201: ASSFMSWN
Arabidopsis Description
GATA20HANL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.