Factsheet for GSMUA_Achr7P09030_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P16730_001	Banana	nucleus	61.54	46.15
GSMUA_Achr2P15750_001	Banana	plastid	37.18	43.61
GSMUA_Achr10P...	Banana	mitochondrion	52.56	41.0
GSMUA_Achr3P00700_001	Banana	nucleus	28.85	36.29
GSMUA_Achr4P30820_001	Banana	nucleus	56.41	32.47
GSMUA_Achr8P33850_001	Banana	nucleus	30.13	31.54
GSMUA_Achr1P26550_001	Banana	nucleus	28.21	30.99
GSMUA_Achr1P14780_001	Banana	nucleus	25.0	30.95
GSMUA_Achr8P24880_001	Banana	nucleus	42.95	30.73
GSMUA_Achr7P03800_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	27.56	30.28
GSMUA_Achr11P...	Banana	plastid	18.59	24.58
TraesCS6D01G173000.1	Wheat	cytosol	53.21	24.27
TraesCS6A01G185900.1	Wheat	cytosol	53.21	24.27
TraesCS6B01G214900.1	Wheat	cytosol	52.56	23.98
HORVU6Hr1G039720.2	Barley	cytosol	52.56	23.84
Os02t0220400-01	Rice	nucleus	51.92	22.95
Zm00001d016361_P001	Maize	nucleus	53.85	22.7
TraesCS7D01G359900.1	Wheat	nucleus	50.64	22.01
TraesCS7A01G363100.1	Wheat	nucleus	50.0	21.91
HORVU7Hr1G086810.1	Barley	nucleus	50.0	21.67
TraesCS7B01G264800.1	Wheat	nucleus	50.0	21.61
Zm00001d046354_P001	Maize	nucleus	50.64	21.35
KXG29816	Sorghum	nucleus	52.56	21.19
EER88552	Sorghum	nucleus	50.0	20.21
Os06t0571800-02	Rice	nucleus	44.23	19.88
GSMUA_Achr3P31070_001	Banana	cytosol, nucleus, plastid	23.72	17.54
GSMUA_Achr6P27250_001	Banana	cytosol, extracellular, nucleus	23.72	15.95
GSMUA_Achr7P25620_001	Banana	nucleus	23.08	15.45

Protein Annotations

MapMan:15.5.1.3	Gene3D:3.30.50.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G09030_001	EnsemblPlants:GSMUA_Achr7P09030_001
EnsemblPlants:GSMUA_Achr7T09030_001	InterPro:IPR000679	InterPro:IPR013088	UniProt:M0TFZ1	PFAM:PF00320	ScanProsite:PS00344
PFscan:PS50114	PANTHER:PTHR10071	PANTHER:PTHR10071:SF226	SMART:SM00401	SUPFAM:SSF57716	UniParc:UPI0002958916
InterPro:Znf_GATA	InterPro:Znf_NHR/GATA	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G09030_001]

Coordinates

chr7:-:7387328..7387871

Molecular Weight (calculated)

17287.8 Da

IEP (calculated)

9.144

GRAVY (calculated)

-0.652

Length

156 amino acids

Sequence
(BLAST)

001: MIGESNYHWV CTTEEEDEMG IMKKMMMSSE GGKPRGDQIQ AEQVRVCSNC STTKTPLWRS GPRGPKSLCN ACGIRQRKAR RAMEAAAMNS GVIPSDAPSG
101: THTEKKQDMH DSRVPFKKRK LLFRGTNSAA LHEVFPQDER DAATLLMALS CGLIRS

Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)

001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG

Arabidopsis Description

GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.