Factsheet for GSMUA_Achr8P24880_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09030_001	Banana	nucleus	30.73	42.95
GSMUA_Achr3P00700_001	Banana	nucleus	22.02	38.71
GSMUA_Achr10P...	Banana	mitochondrion	33.49	36.5
GSMUA_Achr2P15750_001	Banana	plastid	21.56	35.34
GSMUA_Achr2P16730_001	Banana	nucleus	33.03	34.62
GSMUA_Achr7P03800_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	21.56	33.1
GSMUA_Achr1P26550_001	Banana	nucleus	21.56	33.1
GSMUA_Achr8P33850_001	Banana	nucleus	22.48	32.89
GSMUA_Achr1P14780_001	Banana	nucleus	18.81	32.54
GSMUA_Achr4P30820_001	Banana	nucleus	36.7	29.52
KRH19153	Soybean	nucleus	38.99	27.07
GSMUA_Achr11P...	Banana	plastid	14.22	26.27
KRH02716	Soybean	nucleus	38.53	26.09
Bra035633.1-P	Field mustard	nucleus	33.95	24.58
KRH12382	Soybean	nucleus	35.32	24.44
AT4G26150.1	Thale cress	cytosol	38.07	23.58
CDX94365	Canola	nucleus	37.16	22.5
CDY42752	Canola	nucleus	37.61	22.16
CDY42753	Canola	nucleus	37.61	22.16
CDY67546	Canola	nucleus	38.07	22.07
Bra026461.1-P	Field mustard	nucleus	36.24	21.94
CDX89358	Canola	nucleus	35.78	21.67
KRH37384	Soybean	nucleus	33.49	21.66
CDY67979	Canola	nucleus	38.07	21.17
Bra019118.1-P	Field mustard	nucleus	37.61	21.13
CDY32755	Canola	nucleus	37.16	20.93
Bra002788.1-P	Field mustard	nucleus	37.16	20.93
CDX88593	Canola	nucleus	33.95	20.85
CDY20709	Canola	nucleus	37.61	20.81
CDY32891	Canola	nucleus	36.7	20.62
AT5G56860.1	Thale cress	nucleus	36.24	19.85
Bra006851.1-P	Field mustard	nucleus, plastid	33.95	19.27
CDY65439	Canola	nucleus	33.03	18.75
GSMUA_Achr6P27250_001	Banana	cytosol, extracellular, nucleus	19.72	18.53
GSMUA_Achr3P31070_001	Banana	cytosol, nucleus, plastid	17.43	18.01
GSMUA_Achr7P25620_001	Banana	nucleus	17.43	16.31

Protein Annotations

MapMan:15.5.1.3	Gene3D:3.30.50.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr8G24880_001	EnsemblPlants:GSMUA_Achr8P24880_001
EnsemblPlants:GSMUA_Achr8T24880_001	InterPro:IPR000679	InterPro:IPR013088	UniProt:M0TTE1	PFAM:PF00320	ScanProsite:PS00344
PFscan:PS50114	PANTHER:PTHR10071	PANTHER:PTHR10071:SF226	SMART:SM00401	SUPFAM:SSF57716	UniParc:UPI000295150F
InterPro:Znf_GATA	InterPro:Znf_NHR/GATA	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G24880_001]

Coordinates

chr8:-:28903083..28903828

Molecular Weight (calculated)

24218.5 Da

IEP (calculated)

10.221

GRAVY (calculated)

-0.871

Length

218 amino acids

Sequence
(BLAST)

001: MFHQDQHHQV QLSNVHHQQH HHHSHRGQEW VRYLHLSPTY CSSQPNDPLL MTGSGTSSND ELVREAEHES SLRWTRKTVA SDEPAAGRPG RVSRTPHHDS
101: CSSSSPGGVI RFCSDCSTTK TPLWRSGPQG PKSLCNACGI RRRKARRAMA PEAAAAAVGS DGRRIPADRP TKALKQKKKK KKIRFDDDKS SAFHQVFPQD
201: EKDAAILLMA LSCGLIHG

Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)

001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG

Arabidopsis Description

GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.