Factsheet for Bra026461.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89358	Canola	nucleus	99.44	99.44
Bra019118.1-P	Field mustard	nucleus	70.83	65.72
AT4G26150.1	Thale cress	cytosol	60.28	61.65
Bra002788.1-P	Field mustard	nucleus	50.0	46.51
Bra035633.1-P	Field mustard	nucleus	38.89	46.51
Bra006851.1-P	Field mustard	nucleus, plastid	48.89	45.83
Bra009926.1-P	Field mustard	cytosol	9.17	41.77
Bra036600.1-P	Field mustard	nucleus	11.11	38.84
GSMUA_Achr8P24880_001	Banana	nucleus	21.94	36.24
KRH19153	Soybean	nucleus	30.83	35.35
Bra037421.1-P	Field mustard	nucleus	12.22	34.65
Bra020650.1-P	Field mustard	nucleus	13.06	33.57
KRH02716	Soybean	nucleus	30.0	33.54
Bra040288.1-P	Field mustard	nucleus	12.78	33.09
KRH12382	Soybean	nucleus	27.5	31.43
Bra021209.1-P	Field mustard	nucleus	14.17	29.82
Bra022184.1-P	Field mustard	nucleus	13.61	29.52
Bra012742.1-P	Field mustard	nucleus	13.06	28.14
KRH37384	Soybean	nucleus	26.11	27.89
TraesCS6A01G185900.1	Wheat	cytosol	26.11	27.49
Bra033533.1-P	Field mustard	nucleus	13.61	27.37
TraesCS6D01G173000.1	Wheat	cytosol	25.83	27.19
HORVU6Hr1G039720.2	Barley	cytosol	25.56	26.74
Zm00001d016361_P001	Maize	nucleus	27.22	26.49
TraesCS7D01G359900.1	Wheat	nucleus	26.39	26.46
TraesCS7A01G363100.1	Wheat	nucleus	25.83	26.12
Zm00001d046354_P001	Maize	nucleus	26.67	25.95
HORVU7Hr1G086810.1	Barley	nucleus	25.83	25.83
TraesCS6B01G214900.1	Wheat	cytosol	24.44	25.73
TraesCS7B01G264800.1	Wheat	nucleus	25.56	25.48
EER88552	Sorghum	nucleus	27.22	25.39
KXG29816	Sorghum	nucleus	26.94	25.06
Os02t0220400-01	Rice	nucleus	24.17	24.65
Os06t0571800-02	Rice	nucleus	22.78	23.63
Bra039614.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	8.06	21.17
Bra001644.1-P	Field mustard	nucleus	8.33	20.55
Bra011695.1-P	Field mustard	nucleus	11.67	18.83
Bra017766.1-P	Field mustard	nucleus	9.72	18.52
Bra010563.1-P	Field mustard	cytosol	10.56	17.84
Bra012883.1-P	Field mustard	nucleus	12.78	16.55
Bra036854.1-P	Field mustard	nucleus	13.06	16.26
Bra012080.1-P	Field mustard	nucleus	10.56	16.1
Bra037221.1-P	Field mustard	nucleus	9.17	13.92

Protein Annotations

MapMan:15.5.1.3	Gene3D:3.30.50.10	EnsemblPlantsGene:Bra026461	EnsemblPlants:Bra026461.1	EnsemblPlants:Bra026461.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0046872	InterPro:IPR000679	InterPro:IPR013088	UniProt:M4ECF2	PFAM:PF00320	ScanProsite:PS00344
PFscan:PS50114	PANTHER:PTHR10071	PANTHER:PTHR10071:SF191	SMART:SM00401	SUPFAM:SSF57716	UniParc:UPI0002546FC4
InterPro:Znf_GATA	InterPro:Znf_NHR/GATA	SEG:seg	:	:	:

Description

AT4G26150 (E=1e-060) CGA1 | CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1); transcription factor

Coordinates

chrA01:+:9170022..9171748

Molecular Weight (calculated)

40154.0 Da

IEP (calculated)

9.503

GRAVY (calculated)

-0.773

Length

360 amino acids

Sequence
(BLAST)

001: MGSSFHYTID LNDDQIDQPF FSHLGSSLHH NHHHHDDDHL GPSNFSSSSS SLTPSSLSHL PFLINSHQDQ IHVGYNNNTF QGFLDPHLSQ SLETKKFVSN
101: SGLPSSDQVV PKKETRLKLT IRKKDNHHVH EQVKLMKRKT MITTTENNKQ HVSNDQSMNQ RNFEGHDQDH LKKISANQYN IVNETGYNGS NNGVIRICSD
201: CNTTKTPLWR SGPRGPKSLC NACGIRQRKA RQAAMAAAAA TTNSEYLSPP LMKKKMQSKY KRSNEVSNLY SSLAPKVKKC KSMSTSVEEA ISVMERTAAE
301: TQAKSTMSRS SSTSSSSNNF YYDDLAIILS KSSAYQQGFP QDEKDAAILL MALSYGMVHG

Best Arabidopsis Sequence Match ( AT4G26150.1 )
(BLAST)

001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG

Arabidopsis Description

GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.