Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42753 | Canola | nucleus | 70.17 | 66.76 |
| CDY42752 | Canola | nucleus | 69.89 | 66.49 |
| CDY67546 | Canola | nucleus | 69.89 | 65.43 |
| Bra019118.1-P | Field mustard | nucleus | 70.45 | 63.92 |
| CDX94365 | Canola | nucleus | 61.93 | 60.56 |
| Bra026461.1-P | Field mustard | nucleus | 61.65 | 60.28 |
| CDX89358 | Canola | nucleus | 61.08 | 59.72 |
| AT5G56860.1 | Thale cress | nucleus | 55.4 | 48.99 |
| GSMUA_Achr8P24880_001 | Banana | nucleus | 23.58 | 38.07 |
| KRH19153 | Soybean | nucleus | 30.97 | 34.71 |
| KRH02716 | Soybean | nucleus | 30.97 | 33.85 |
| AT5G26930.1 | Thale cress | cytosol | 11.36 | 33.33 |
| KRH12382 | Soybean | nucleus | 29.55 | 33.02 |
| AT5G49300.1 | Thale cress | cytosol | 12.78 | 32.37 |
| AT3G06740.1 | Thale cress | nucleus | 13.35 | 31.54 |
| KRH37384 | Soybean | nucleus | 28.41 | 29.67 |
| TraesCS7A01G363100.1 | Wheat | nucleus | 28.12 | 27.81 |
| HORVU7Hr1G086810.1 | Barley | nucleus | 28.41 | 27.78 |
| TraesCS6D01G173000.1 | Wheat | cytosol | 26.99 | 27.78 |
| TraesCS7D01G359900.1 | Wheat | nucleus | 28.12 | 27.58 |
| TraesCS6A01G185900.1 | Wheat | cytosol | 26.7 | 27.49 |
| EER88552 | Sorghum | nucleus | 30.11 | 27.46 |
| TraesCS6B01G214900.1 | Wheat | cytosol | 26.42 | 27.19 |
| Zm00001d046354_P001 | Maize | nucleus | 28.41 | 27.03 |
| TraesCS7B01G264800.1 | Wheat | nucleus | 27.56 | 26.87 |
| Os06t0571800-02 | Rice | nucleus | 26.42 | 26.8 |
| HORVU6Hr1G039720.2 | Barley | cytosol | 26.14 | 26.74 |
| AT3G16870.1 | Thale cress | nucleus | 14.2 | 26.32 |
| Zm00001d016361_P001 | Maize | nucleus | 27.56 | 26.22 |
| Os02t0220400-01 | Rice | nucleus | 25.28 | 25.21 |
| KXG29816 | Sorghum | nucleus | 26.99 | 24.55 |
| AT4G36620.1 | Thale cress | cytosol | 13.64 | 22.75 |
| AT4G16141.1 | Thale cress | cytosol | 11.65 | 20.81 |
| AT2G18380.1 | Thale cress | cytosol | 11.65 | 19.71 |
| AT3G50870.1 | Thale cress | cytosol | 14.2 | 16.95 |
Protein Annotations
| MapMan:15.5.1.3 | Gene3D:3.30.50.10 | EntrezGene:828721 | ProteinID:AEE85164.1 | ArrayExpress:AT4G26150 | EnsemblPlantsGene:AT4G26150 |
| RefSeq:AT4G26150 | TAIR:AT4G26150 | RefSeq:AT4G26150-TAIR-G | EnsemblPlants:AT4G26150.1 | TAIR:AT4G26150.1 | ProteinID:CAB39680.1 |
| ProteinID:CAB79470.1 | Symbol:CGA1 | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0001085 | GO:GO:0001228 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006366 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 |
| GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009658 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009735 |
| GO:GO:0009736 | GO:GO:0009739 | GO:GO:0009740 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009938 | GO:GO:0009987 | GO:GO:0010029 | GO:GO:0010114 | GO:GO:0010151 | GO:GO:0010167 |
| GO:GO:0010187 | GO:GO:0010380 | GO:GO:0010468 | GO:GO:0016043 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0043610 | GO:GO:0044212 | GO:GO:0045944 | GO:GO:0046872 | GO:GO:0080050 | GO:GO:0090693 |
| GO:GO:1902326 | GO:GO:2000028 | InterPro:IPR000679 | InterPro:IPR013088 | RefSeq:NP_194345.1 | PFAM:PF00320 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0025022 | ScanProsite:PS00344 | PFscan:PS50114 | PANTHER:PTHR10071 | PANTHER:PTHR10071:SF306 | UniProt:Q9SZI6 |
| SMART:SM00401 | SUPFAM:SSF57716 | UniParc:UPI00000A4837 | InterPro:Znf_GATA | InterPro:Znf_NHR/GATA | SEG:seg |
Description
GATA22Putative GATA transcription factor 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI6]
Coordinates
chr4:+:13253084..13255106
Molecular Weight (calculated)
39347.5 Da
IEP (calculated)
9.593
GRAVY (calculated)
-0.702
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
101: DGGSSSSDQM VPKKETRLKL TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS SNLSNSERQN GYNNDCVIRI
201: CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ RKARRAAMAT ATATAVSGVS PPVMKKKMQN KNKISNGVYK ILSPLPLKVN TCKRMITLEE TALAEDLETQ
301: SNSTMLSSSD NIYFDDLALL LSKSSAYQQV FPQDEKEAAI LLMALSHGMV HG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.